Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC25.63■■□□□ 1.69
CTDP1Q9Y5B0 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CTDP1Q9Y5B0 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CTDP1Q9Y5B0 AC004812.2-201ENST00000611079 2094 ntBASIC25.62■■□□□ 1.69
CTDP1Q9Y5B0 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CTDP1Q9Y5B0 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CTDP1Q9Y5B0 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC25.62■■□□□ 1.69
CTDP1Q9Y5B0 AP005435.1-201ENST00000529293 1178 ntBASIC25.62■■□□□ 1.69
CTDP1Q9Y5B0 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC25.62■■□□□ 1.69
CTDP1Q9Y5B0 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CTDP1Q9Y5B0 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC25.62■■□□□ 1.69
CTDP1Q9Y5B0 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC25.61■■□□□ 1.69
CTDP1Q9Y5B0 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
CTDP1Q9Y5B0 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
CTDP1Q9Y5B0 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC25.61■■□□□ 1.69
CTDP1Q9Y5B0 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
CTDP1Q9Y5B0 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CTDP1Q9Y5B0 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC25.61■■□□□ 1.69
CTDP1Q9Y5B0 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC25.61■■□□□ 1.69
CTDP1Q9Y5B0 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
CTDP1Q9Y5B0 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC25.61■■□□□ 1.69
CTDP1Q9Y5B0 AC079630.1-202ENST00000618127 1840 ntBASIC25.6■■□□□ 1.69
CTDP1Q9Y5B0 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
CTDP1Q9Y5B0 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CTDP1Q9Y5B0 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC25.6■■□□□ 1.69
CTDP1Q9Y5B0 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC25.6■■□□□ 1.69
CTDP1Q9Y5B0 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CTDP1Q9Y5B0 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
CTDP1Q9Y5B0 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
CTDP1Q9Y5B0 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC25.6■■□□□ 1.69
CTDP1Q9Y5B0 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CTDP1Q9Y5B0 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CTDP1Q9Y5B0 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CTDP1Q9Y5B0 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC25.59■■□□□ 1.69
CTDP1Q9Y5B0 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CTDP1Q9Y5B0 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
CTDP1Q9Y5B0 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC25.59■■□□□ 1.69
CTDP1Q9Y5B0 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC25.59■■□□□ 1.69
CTDP1Q9Y5B0 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
CTDP1Q9Y5B0 LHPP-203ENST00000392757 840 ntTSL 3 BASIC25.59■■□□□ 1.69
CTDP1Q9Y5B0 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
CTDP1Q9Y5B0 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
CTDP1Q9Y5B0 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC25.59■■□□□ 1.69
CTDP1Q9Y5B0 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
CTDP1Q9Y5B0 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC25.59■■□□□ 1.69
CTDP1Q9Y5B0 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
CTDP1Q9Y5B0 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CTDP1Q9Y5B0 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
CTDP1Q9Y5B0 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.69
CTDP1Q9Y5B0 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CTDP1Q9Y5B0 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC25.58■■□□□ 1.69
CTDP1Q9Y5B0 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC25.58■■□□□ 1.69
CTDP1Q9Y5B0 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC25.58■■□□□ 1.69
CTDP1Q9Y5B0 AC027612.3-201ENST00000413684 1047 ntBASIC25.58■■□□□ 1.69
CTDP1Q9Y5B0 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC25.58■■□□□ 1.69
CTDP1Q9Y5B0 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CTDP1Q9Y5B0 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC25.58■■□□□ 1.69
CTDP1Q9Y5B0 STX4-202ENST00000394998 1498 ntTSL 2 BASIC25.58■■□□□ 1.69
CTDP1Q9Y5B0 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.68
CTDP1Q9Y5B0 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
CTDP1Q9Y5B0 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CTDP1Q9Y5B0 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CTDP1Q9Y5B0 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CTDP1Q9Y5B0 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CTDP1Q9Y5B0 RAB43-208ENST00000615093 783 ntTSL 5 BASIC25.57■■□□□ 1.68
CTDP1Q9Y5B0 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CTDP1Q9Y5B0 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC25.57■■□□□ 1.68
CTDP1Q9Y5B0 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC25.57■■□□□ 1.68
CTDP1Q9Y5B0 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
CTDP1Q9Y5B0 ABCB10P4-201ENST00000566803 2184 ntBASIC25.56■■□□□ 1.68
CTDP1Q9Y5B0 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
CTDP1Q9Y5B0 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC25.56■■□□□ 1.68
CTDP1Q9Y5B0 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC25.56■■□□□ 1.68
CTDP1Q9Y5B0 AC123595.1-201ENST00000440769 1046 ntBASIC25.56■■□□□ 1.68
CTDP1Q9Y5B0 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CTDP1Q9Y5B0 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
CTDP1Q9Y5B0 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CTDP1Q9Y5B0 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
CTDP1Q9Y5B0 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CTDP1Q9Y5B0 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC25.55■■□□□ 1.68
CTDP1Q9Y5B0 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC25.55■■□□□ 1.68
CTDP1Q9Y5B0 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
CTDP1Q9Y5B0 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC25.55■■□□□ 1.68
CTDP1Q9Y5B0 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CTDP1Q9Y5B0 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
CTDP1Q9Y5B0 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC25.55■■□□□ 1.68
CTDP1Q9Y5B0 AC004687.1-201ENST00000579003 1625 ntBASIC25.55■■□□□ 1.68
CTDP1Q9Y5B0 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CTDP1Q9Y5B0 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
CTDP1Q9Y5B0 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
CTDP1Q9Y5B0 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
CTDP1Q9Y5B0 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC25.54■■□□□ 1.68
CTDP1Q9Y5B0 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC25.54■■□□□ 1.68
CTDP1Q9Y5B0 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
CTDP1Q9Y5B0 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC25.54■■□□□ 1.68
CTDP1Q9Y5B0 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
CTDP1Q9Y5B0 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC25.54■■□□□ 1.68
CTDP1Q9Y5B0 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
CTDP1Q9Y5B0 AC105233.4-201ENST00000642045 216 ntBASIC25.54■■□□□ 1.68
CTDP1Q9Y5B0 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms