Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LIN7CQ9NUP9 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LIN7CQ9NUP9 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC18.33■□□□□ 0.52
LIN7CQ9NUP9 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC18.33■□□□□ 0.52
LIN7CQ9NUP9 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LIN7CQ9NUP9 AC092028.1-203ENST00000608262 953 ntBASIC18.33■□□□□ 0.52
LIN7CQ9NUP9 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
LIN7CQ9NUP9 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
LIN7CQ9NUP9 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LIN7CQ9NUP9 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LIN7CQ9NUP9 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC18.33■□□□□ 0.52
LIN7CQ9NUP9 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC18.33■□□□□ 0.52
LIN7CQ9NUP9 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LIN7CQ9NUP9 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LIN7CQ9NUP9 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
LIN7CQ9NUP9 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LIN7CQ9NUP9 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
LIN7CQ9NUP9 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LIN7CQ9NUP9 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
LIN7CQ9NUP9 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LIN7CQ9NUP9 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC18.32■□□□□ 0.52
LIN7CQ9NUP9 GUSBP5-201ENST00000418136 578 ntBASIC18.32■□□□□ 0.52
LIN7CQ9NUP9 SENP5-202ENST00000419026 973 ntTSL 3 BASIC18.32■□□□□ 0.52
LIN7CQ9NUP9 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC18.32■□□□□ 0.52
LIN7CQ9NUP9 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LIN7CQ9NUP9 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC18.32■□□□□ 0.52
LIN7CQ9NUP9 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LIN7CQ9NUP9 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC18.32■□□□□ 0.52
LIN7CQ9NUP9 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LIN7CQ9NUP9 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LIN7CQ9NUP9 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
LIN7CQ9NUP9 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LIN7CQ9NUP9 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LIN7CQ9NUP9 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
LIN7CQ9NUP9 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LIN7CQ9NUP9 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LIN7CQ9NUP9 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC18.31■□□□□ 0.52
LIN7CQ9NUP9 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LIN7CQ9NUP9 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LIN7CQ9NUP9 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC18.31■□□□□ 0.52
LIN7CQ9NUP9 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC18.31■□□□□ 0.52
LIN7CQ9NUP9 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LIN7CQ9NUP9 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC18.31■□□□□ 0.52
LIN7CQ9NUP9 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
LIN7CQ9NUP9 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LIN7CQ9NUP9 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
LIN7CQ9NUP9 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC18.31■□□□□ 0.52
LIN7CQ9NUP9 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LIN7CQ9NUP9 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LIN7CQ9NUP9 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LIN7CQ9NUP9 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
LIN7CQ9NUP9 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LIN7CQ9NUP9 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
LIN7CQ9NUP9 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.3■□□□□ 0.52
LIN7CQ9NUP9 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LIN7CQ9NUP9 AC004448.1-201ENST00000458332 883 ntBASIC18.3■□□□□ 0.52
LIN7CQ9NUP9 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC18.3■□□□□ 0.52
LIN7CQ9NUP9 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LIN7CQ9NUP9 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LIN7CQ9NUP9 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LIN7CQ9NUP9 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
LIN7CQ9NUP9 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LIN7CQ9NUP9 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LIN7CQ9NUP9 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
LIN7CQ9NUP9 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LIN7CQ9NUP9 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LIN7CQ9NUP9 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LIN7CQ9NUP9 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC18.29■□□□□ 0.52
LIN7CQ9NUP9 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LIN7CQ9NUP9 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC18.29■□□□□ 0.52
LIN7CQ9NUP9 CREM-229ENST00000474362 1030 ntTSL 2 BASIC18.29■□□□□ 0.52
LIN7CQ9NUP9 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
LIN7CQ9NUP9 SNX5-217ENST00000606557 1087 ntBASIC18.29■□□□□ 0.52
LIN7CQ9NUP9 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC18.29■□□□□ 0.52
LIN7CQ9NUP9 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
LIN7CQ9NUP9 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
LIN7CQ9NUP9 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC18.29■□□□□ 0.52
LIN7CQ9NUP9 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LIN7CQ9NUP9 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LIN7CQ9NUP9 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LIN7CQ9NUP9 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LIN7CQ9NUP9 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC18.29■□□□□ 0.52
LIN7CQ9NUP9 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC18.29■□□□□ 0.52
LIN7CQ9NUP9 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LIN7CQ9NUP9 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
LIN7CQ9NUP9 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC18.28■□□□□ 0.52
LIN7CQ9NUP9 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LIN7CQ9NUP9 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LIN7CQ9NUP9 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LIN7CQ9NUP9 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC18.28■□□□□ 0.52
LIN7CQ9NUP9 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LIN7CQ9NUP9 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LIN7CQ9NUP9 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC18.28■□□□□ 0.52
LIN7CQ9NUP9 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
LIN7CQ9NUP9 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.28■□□□□ 0.52
LIN7CQ9NUP9 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
LIN7CQ9NUP9 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.28■□□□□ 0.52
LIN7CQ9NUP9 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LIN7CQ9NUP9 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
LIN7CQ9NUP9 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 139.7 ms