Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC27.07■■□□□ 1.92
ECHDC1Q9NTX5 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC27.07■■□□□ 1.92
ECHDC1Q9NTX5 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC27.07■■□□□ 1.92
ECHDC1Q9NTX5 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
ECHDC1Q9NTX5 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC27.07■■□□□ 1.92
ECHDC1Q9NTX5 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
ECHDC1Q9NTX5 HES6-206ENST00000409574 738 ntTSL 2 BASIC27.07■■□□□ 1.92
ECHDC1Q9NTX5 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC27.07■■□□□ 1.92
ECHDC1Q9NTX5 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
ECHDC1Q9NTX5 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC27.07■■□□□ 1.92
ECHDC1Q9NTX5 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC27.07■■□□□ 1.92
ECHDC1Q9NTX5 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
ECHDC1Q9NTX5 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC27.06■■□□□ 1.92
ECHDC1Q9NTX5 AC068473.5-201ENST00000616428 2072 ntBASIC27.06■■□□□ 1.92
ECHDC1Q9NTX5 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC27.06■■□□□ 1.92
ECHDC1Q9NTX5 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC27.06■■□□□ 1.92
ECHDC1Q9NTX5 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
ECHDC1Q9NTX5 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC27.06■■□□□ 1.92
ECHDC1Q9NTX5 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC27.06■■□□□ 1.92
ECHDC1Q9NTX5 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC27.06■■□□□ 1.92
ECHDC1Q9NTX5 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
ECHDC1Q9NTX5 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC27.05■■□□□ 1.92
ECHDC1Q9NTX5 AC011298.3-201ENST00000615796 283 ntBASIC27.05■■□□□ 1.92
ECHDC1Q9NTX5 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
ECHDC1Q9NTX5 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC27.05■■□□□ 1.92
ECHDC1Q9NTX5 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC27.05■■□□□ 1.92
ECHDC1Q9NTX5 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC27.05■■□□□ 1.92
ECHDC1Q9NTX5 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC27.05■■□□□ 1.92
ECHDC1Q9NTX5 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC27.04■■□□□ 1.92
ECHDC1Q9NTX5 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
ECHDC1Q9NTX5 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
ECHDC1Q9NTX5 AC096631.2-201ENST00000436136 790 ntBASIC27.04■■□□□ 1.92
ECHDC1Q9NTX5 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC27.04■■□□□ 1.92
ECHDC1Q9NTX5 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
ECHDC1Q9NTX5 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
ECHDC1Q9NTX5 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
ECHDC1Q9NTX5 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
ECHDC1Q9NTX5 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
ECHDC1Q9NTX5 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC27.03■■□□□ 1.92
ECHDC1Q9NTX5 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC27.03■■□□□ 1.92
ECHDC1Q9NTX5 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC27.03■■□□□ 1.92
ECHDC1Q9NTX5 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC27.03■■□□□ 1.92
ECHDC1Q9NTX5 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
ECHDC1Q9NTX5 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC27.03■■□□□ 1.92
ECHDC1Q9NTX5 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC27.03■■□□□ 1.92
ECHDC1Q9NTX5 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC27.02■■□□□ 1.92
ECHDC1Q9NTX5 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
ECHDC1Q9NTX5 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC27.02■■□□□ 1.92
ECHDC1Q9NTX5 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
ECHDC1Q9NTX5 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC27.02■■□□□ 1.92
ECHDC1Q9NTX5 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC27.02■■□□□ 1.92
ECHDC1Q9NTX5 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC27.02■■□□□ 1.92
ECHDC1Q9NTX5 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC27.02■■□□□ 1.92
ECHDC1Q9NTX5 AL136162.1-201ENST00000607711 1078 ntBASIC27.02■■□□□ 1.92
ECHDC1Q9NTX5 AC136469.2-201ENST00000623944 1028 ntBASIC27.02■■□□□ 1.92
ECHDC1Q9NTX5 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC27.02■■□□□ 1.92
ECHDC1Q9NTX5 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC27.02■■□□□ 1.92
ECHDC1Q9NTX5 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC27.02■■□□□ 1.92
ECHDC1Q9NTX5 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC27.01■■□□□ 1.92
ECHDC1Q9NTX5 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.92
ECHDC1Q9NTX5 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
ECHDC1Q9NTX5 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC27.01■■□□□ 1.91
ECHDC1Q9NTX5 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC27.01■■□□□ 1.91
ECHDC1Q9NTX5 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
ECHDC1Q9NTX5 COMT-203ENST00000403184 2217 ntTSL 2 BASIC27.01■■□□□ 1.91
ECHDC1Q9NTX5 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
ECHDC1Q9NTX5 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC27.01■■□□□ 1.91
ECHDC1Q9NTX5 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC27.01■■□□□ 1.91
ECHDC1Q9NTX5 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC27■■□□□ 1.91
ECHDC1Q9NTX5 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC27■■□□□ 1.91
ECHDC1Q9NTX5 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC27■■□□□ 1.91
ECHDC1Q9NTX5 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC27■■□□□ 1.91
ECHDC1Q9NTX5 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC27■■□□□ 1.91
ECHDC1Q9NTX5 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC27■■□□□ 1.91
ECHDC1Q9NTX5 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC27■■□□□ 1.91
ECHDC1Q9NTX5 AC110285.6-201ENST00000617652 491 ntBASIC27■■□□□ 1.91
ECHDC1Q9NTX5 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC27■■□□□ 1.91
ECHDC1Q9NTX5 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
ECHDC1Q9NTX5 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC27■■□□□ 1.91
ECHDC1Q9NTX5 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
ECHDC1Q9NTX5 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC27■■□□□ 1.91
ECHDC1Q9NTX5 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC27■■□□□ 1.91
ECHDC1Q9NTX5 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC26.99■■□□□ 1.91
ECHDC1Q9NTX5 C1orf229-201ENST00000623686 2258 ntBASIC26.99■■□□□ 1.91
ECHDC1Q9NTX5 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
ECHDC1Q9NTX5 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC26.99■■□□□ 1.91
ECHDC1Q9NTX5 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC26.99■■□□□ 1.91
ECHDC1Q9NTX5 AC024257.2-201ENST00000549699 147 ntBASIC26.99■■□□□ 1.91
ECHDC1Q9NTX5 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC26.99■■□□□ 1.91
ECHDC1Q9NTX5 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
ECHDC1Q9NTX5 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
ECHDC1Q9NTX5 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
ECHDC1Q9NTX5 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC26.98■■□□□ 1.91
ECHDC1Q9NTX5 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC26.98■■□□□ 1.91
ECHDC1Q9NTX5 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC26.98■■□□□ 1.91
ECHDC1Q9NTX5 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC26.98■■□□□ 1.91
ECHDC1Q9NTX5 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC26.98■■□□□ 1.91
ECHDC1Q9NTX5 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC26.98■■□□□ 1.91
ECHDC1Q9NTX5 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
ECHDC1Q9NTX5 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms