Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC23.67■■□□□ 1.38
CISHQ9NSE2 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CISHQ9NSE2 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC23.67■■□□□ 1.38
CISHQ9NSE2 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC23.67■■□□□ 1.38
CISHQ9NSE2 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC23.67■■□□□ 1.38
CISHQ9NSE2 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CISHQ9NSE2 UNC93B3-201ENST00000308076 687 ntBASIC23.67■■□□□ 1.38
CISHQ9NSE2 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC23.67■■□□□ 1.38
CISHQ9NSE2 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CISHQ9NSE2 AL138724.1-201ENST00000606771 1088 ntBASIC23.67■■□□□ 1.38
CISHQ9NSE2 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC23.67■■□□□ 1.38
CISHQ9NSE2 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC23.67■■□□□ 1.38
CISHQ9NSE2 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CISHQ9NSE2 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CISHQ9NSE2 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CISHQ9NSE2 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC23.66■■□□□ 1.38
CISHQ9NSE2 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CISHQ9NSE2 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
CISHQ9NSE2 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CISHQ9NSE2 HES6-206ENST00000409574 738 ntTSL 2 BASIC23.66■■□□□ 1.38
CISHQ9NSE2 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CISHQ9NSE2 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC23.66■■□□□ 1.38
CISHQ9NSE2 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
CISHQ9NSE2 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
CISHQ9NSE2 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
CISHQ9NSE2 AC068473.5-201ENST00000616428 2072 ntBASIC23.66■■□□□ 1.38
CISHQ9NSE2 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
CISHQ9NSE2 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CISHQ9NSE2 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CISHQ9NSE2 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CISHQ9NSE2 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
CISHQ9NSE2 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC23.65■■□□□ 1.38
CISHQ9NSE2 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CISHQ9NSE2 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC23.65■■□□□ 1.38
CISHQ9NSE2 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC23.65■■□□□ 1.38
CISHQ9NSE2 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CISHQ9NSE2 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC23.64■■□□□ 1.38
CISHQ9NSE2 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CISHQ9NSE2 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC23.64■■□□□ 1.37
CISHQ9NSE2 AC096631.2-201ENST00000436136 790 ntBASIC23.64■■□□□ 1.37
CISHQ9NSE2 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
CISHQ9NSE2 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
CISHQ9NSE2 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.37
CISHQ9NSE2 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC23.64■■□□□ 1.37
CISHQ9NSE2 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CISHQ9NSE2 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
CISHQ9NSE2 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
CISHQ9NSE2 COMT-203ENST00000403184 2217 ntTSL 2 BASIC23.63■■□□□ 1.37
CISHQ9NSE2 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CISHQ9NSE2 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
CISHQ9NSE2 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
CISHQ9NSE2 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CISHQ9NSE2 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
CISHQ9NSE2 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
CISHQ9NSE2 AC011298.3-201ENST00000615796 283 ntBASIC23.63■■□□□ 1.37
CISHQ9NSE2 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CISHQ9NSE2 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CISHQ9NSE2 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CISHQ9NSE2 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC23.63■■□□□ 1.37
CISHQ9NSE2 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CISHQ9NSE2 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC23.62■■□□□ 1.37
CISHQ9NSE2 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CISHQ9NSE2 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
CISHQ9NSE2 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC23.62■■□□□ 1.37
CISHQ9NSE2 C1orf229-201ENST00000623686 2258 ntBASIC23.62■■□□□ 1.37
CISHQ9NSE2 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
CISHQ9NSE2 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
CISHQ9NSE2 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CISHQ9NSE2 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CISHQ9NSE2 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
CISHQ9NSE2 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC23.61■■□□□ 1.37
CISHQ9NSE2 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CISHQ9NSE2 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC23.61■■□□□ 1.37
CISHQ9NSE2 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC23.61■■□□□ 1.37
CISHQ9NSE2 AL136162.1-201ENST00000607711 1078 ntBASIC23.61■■□□□ 1.37
CISHQ9NSE2 AC136469.2-201ENST00000623944 1028 ntBASIC23.61■■□□□ 1.37
CISHQ9NSE2 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
CISHQ9NSE2 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC23.61■■□□□ 1.37
CISHQ9NSE2 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC23.61■■□□□ 1.37
CISHQ9NSE2 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC23.61■■□□□ 1.37
CISHQ9NSE2 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC23.6■■□□□ 1.37
CISHQ9NSE2 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC23.6■■□□□ 1.37
CISHQ9NSE2 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
CISHQ9NSE2 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
CISHQ9NSE2 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC23.6■■□□□ 1.37
CISHQ9NSE2 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
CISHQ9NSE2 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CISHQ9NSE2 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
CISHQ9NSE2 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC23.6■■□□□ 1.37
CISHQ9NSE2 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC23.6■■□□□ 1.37
CISHQ9NSE2 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CISHQ9NSE2 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
CISHQ9NSE2 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC23.6■■□□□ 1.37
CISHQ9NSE2 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
CISHQ9NSE2 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CISHQ9NSE2 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC23.59■■□□□ 1.37
CISHQ9NSE2 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC23.59■■□□□ 1.37
CISHQ9NSE2 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CISHQ9NSE2 LTK-203ENST00000453182 2412 ntTSL 2 BASIC23.59■■□□□ 1.37
CISHQ9NSE2 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms