Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 BX664725.1-201ENST00000438252 379 ntBASIC19.99■□□□□ 0.79
HINT3Q9NQE9 Z92544.1-202ENST00000571933 1220 ntBASIC19.99■□□□□ 0.79
HINT3Q9NQE9 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HINT3Q9NQE9 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HINT3Q9NQE9 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HINT3Q9NQE9 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
HINT3Q9NQE9 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
HINT3Q9NQE9 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HINT3Q9NQE9 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
HINT3Q9NQE9 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
HINT3Q9NQE9 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HINT3Q9NQE9 AC080038.3-201ENST00000623346 1952 ntBASIC19.98■□□□□ 0.79
HINT3Q9NQE9 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
HINT3Q9NQE9 HES6-204ENST00000409182 863 ntTSL 2 BASIC19.98■□□□□ 0.79
HINT3Q9NQE9 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.98■□□□□ 0.79
HINT3Q9NQE9 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.98■□□□□ 0.79
HINT3Q9NQE9 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HINT3Q9NQE9 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HINT3Q9NQE9 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HINT3Q9NQE9 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HINT3Q9NQE9 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.97■□□□□ 0.79
HINT3Q9NQE9 AC092053.2-201ENST00000640557 1818 ntBASIC19.97■□□□□ 0.79
HINT3Q9NQE9 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.97■□□□□ 0.79
HINT3Q9NQE9 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HINT3Q9NQE9 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
HINT3Q9NQE9 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
HINT3Q9NQE9 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HINT3Q9NQE9 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HINT3Q9NQE9 AC239859.2-201ENST00000444165 318 ntBASIC19.97■□□□□ 0.79
HINT3Q9NQE9 KRT125P-201ENST00000546827 989 ntBASIC19.97■□□□□ 0.79
HINT3Q9NQE9 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
HINT3Q9NQE9 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.97■□□□□ 0.79
HINT3Q9NQE9 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
HINT3Q9NQE9 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
HINT3Q9NQE9 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.97■□□□□ 0.79
HINT3Q9NQE9 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
HINT3Q9NQE9 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HINT3Q9NQE9 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
HINT3Q9NQE9 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
HINT3Q9NQE9 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HINT3Q9NQE9 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HINT3Q9NQE9 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
HINT3Q9NQE9 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
HINT3Q9NQE9 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.96■□□□□ 0.79
HINT3Q9NQE9 AC137630.3-201ENST00000607245 391 ntBASIC19.96■□□□□ 0.79
HINT3Q9NQE9 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
HINT3Q9NQE9 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.96■□□□□ 0.79
HINT3Q9NQE9 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.96■□□□□ 0.79
HINT3Q9NQE9 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.96■□□□□ 0.79
HINT3Q9NQE9 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.96■□□□□ 0.79
HINT3Q9NQE9 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
HINT3Q9NQE9 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HINT3Q9NQE9 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
HINT3Q9NQE9 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.95■□□□□ 0.78
HINT3Q9NQE9 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HINT3Q9NQE9 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.78
HINT3Q9NQE9 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
HINT3Q9NQE9 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
HINT3Q9NQE9 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.95■□□□□ 0.78
HINT3Q9NQE9 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.95■□□□□ 0.78
HINT3Q9NQE9 AC087742.1-201ENST00000575880 1738 ntBASIC19.95■□□□□ 0.78
HINT3Q9NQE9 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.95■□□□□ 0.78
HINT3Q9NQE9 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
HINT3Q9NQE9 C11orf96-202ENST00000528572 1834 ntBASIC19.95■□□□□ 0.78
HINT3Q9NQE9 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.95■□□□□ 0.78
HINT3Q9NQE9 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
HINT3Q9NQE9 AC144652.1-201ENST00000609974 1624 ntBASIC19.94■□□□□ 0.78
HINT3Q9NQE9 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HINT3Q9NQE9 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
HINT3Q9NQE9 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HINT3Q9NQE9 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
HINT3Q9NQE9 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HINT3Q9NQE9 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HINT3Q9NQE9 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
HINT3Q9NQE9 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HINT3Q9NQE9 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.94■□□□□ 0.78
HINT3Q9NQE9 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HINT3Q9NQE9 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.94■□□□□ 0.78
HINT3Q9NQE9 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HINT3Q9NQE9 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HINT3Q9NQE9 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HINT3Q9NQE9 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HINT3Q9NQE9 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.94■□□□□ 0.78
HINT3Q9NQE9 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
HINT3Q9NQE9 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HINT3Q9NQE9 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HINT3Q9NQE9 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
HINT3Q9NQE9 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
HINT3Q9NQE9 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
HINT3Q9NQE9 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.93■□□□□ 0.78
HINT3Q9NQE9 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.93■□□□□ 0.78
HINT3Q9NQE9 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HINT3Q9NQE9 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
HINT3Q9NQE9 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
HINT3Q9NQE9 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
HINT3Q9NQE9 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
HINT3Q9NQE9 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HINT3Q9NQE9 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
HINT3Q9NQE9 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HINT3Q9NQE9 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms