Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
GCM1Q9NP62 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
GCM1Q9NP62 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
GCM1Q9NP62 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
GCM1Q9NP62 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
GCM1Q9NP62 MIR3181-201ENST00000578512 73 ntBASIC18.84■□□□□ 0.61
GCM1Q9NP62 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.84■□□□□ 0.61
GCM1Q9NP62 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC18.84■□□□□ 0.61
GCM1Q9NP62 AL138724.1-201ENST00000606771 1088 ntBASIC18.84■□□□□ 0.61
GCM1Q9NP62 AL136162.1-201ENST00000607711 1078 ntBASIC18.84■□□□□ 0.61
GCM1Q9NP62 pRNA.6-201ENST00000610482 90 ntBASIC18.84■□□□□ 0.61
GCM1Q9NP62 pRNA.5-201ENST00000612139 90 ntBASIC18.84■□□□□ 0.61
GCM1Q9NP62 pRNA.11-201ENST00000618423 90 ntBASIC18.84■□□□□ 0.61
GCM1Q9NP62 pRNA.13-201ENST00000619112 90 ntBASIC18.84■□□□□ 0.61
GCM1Q9NP62 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GCM1Q9NP62 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GCM1Q9NP62 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
GCM1Q9NP62 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
GCM1Q9NP62 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC18.84■□□□□ 0.61
GCM1Q9NP62 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
GCM1Q9NP62 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC18.83■□□□□ 0.61
GCM1Q9NP62 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.83■□□□□ 0.61
GCM1Q9NP62 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
GCM1Q9NP62 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
GCM1Q9NP62 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
GCM1Q9NP62 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.83■□□□□ 0.61
GCM1Q9NP62 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
GCM1Q9NP62 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.83■□□□□ 0.6
GCM1Q9NP62 RALB-208ENST00000631312 311 ntTSL 5 BASIC18.83■□□□□ 0.6
GCM1Q9NP62 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
GCM1Q9NP62 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.6
GCM1Q9NP62 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
GCM1Q9NP62 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.82■□□□□ 0.6
GCM1Q9NP62 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
GCM1Q9NP62 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
GCM1Q9NP62 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GCM1Q9NP62 AC135279.3-201ENST00000610945 1311 ntBASIC18.82■□□□□ 0.6
GCM1Q9NP62 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
GCM1Q9NP62 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.82■□□□□ 0.6
GCM1Q9NP62 HES6-206ENST00000409574 738 ntTSL 2 BASIC18.82■□□□□ 0.6
GCM1Q9NP62 PBX2P1-201ENST00000493219 1291 ntBASIC18.82■□□□□ 0.6
GCM1Q9NP62 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
GCM1Q9NP62 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
GCM1Q9NP62 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC18.82■□□□□ 0.6
GCM1Q9NP62 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
GCM1Q9NP62 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC18.82■□□□□ 0.6
GCM1Q9NP62 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
GCM1Q9NP62 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
GCM1Q9NP62 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GCM1Q9NP62 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
GCM1Q9NP62 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.82■□□□□ 0.6
GCM1Q9NP62 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
GCM1Q9NP62 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GCM1Q9NP62 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC18.81■□□□□ 0.6
GCM1Q9NP62 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
GCM1Q9NP62 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GCM1Q9NP62 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC18.81■□□□□ 0.6
GCM1Q9NP62 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
GCM1Q9NP62 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC18.81■□□□□ 0.6
GCM1Q9NP62 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GCM1Q9NP62 AC024257.2-201ENST00000549699 147 ntBASIC18.81■□□□□ 0.6
GCM1Q9NP62 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC18.81■□□□□ 0.6
GCM1Q9NP62 AL499627.2-201ENST00000606283 725 ntBASIC18.81■□□□□ 0.6
GCM1Q9NP62 AC011298.3-201ENST00000615796 283 ntBASIC18.81■□□□□ 0.6
GCM1Q9NP62 AC106739.1-201ENST00000617035 715 ntBASIC18.81■□□□□ 0.6
GCM1Q9NP62 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC18.81■□□□□ 0.6
GCM1Q9NP62 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.81■□□□□ 0.6
GCM1Q9NP62 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GCM1Q9NP62 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GCM1Q9NP62 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
GCM1Q9NP62 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
GCM1Q9NP62 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GCM1Q9NP62 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
GCM1Q9NP62 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC18.8■□□□□ 0.6
GCM1Q9NP62 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GCM1Q9NP62 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GCM1Q9NP62 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
GCM1Q9NP62 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC18.8■□□□□ 0.6
GCM1Q9NP62 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
GCM1Q9NP62 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GCM1Q9NP62 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GCM1Q9NP62 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
GCM1Q9NP62 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.8■□□□□ 0.6
GCM1Q9NP62 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GCM1Q9NP62 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
GCM1Q9NP62 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
GCM1Q9NP62 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GCM1Q9NP62 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC18.79■□□□□ 0.6
GCM1Q9NP62 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
GCM1Q9NP62 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
GCM1Q9NP62 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
GCM1Q9NP62 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
GCM1Q9NP62 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC18.79■□□□□ 0.6
GCM1Q9NP62 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC18.79■□□□□ 0.6
GCM1Q9NP62 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC18.79■□□□□ 0.6
GCM1Q9NP62 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.79■□□□□ 0.6
GCM1Q9NP62 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.79■□□□□ 0.6
GCM1Q9NP62 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC18.79■□□□□ 0.6
GCM1Q9NP62 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GCM1Q9NP62 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms