Protein–RNA interactions for Protein: Q9HCL0

PCDH18, Protocadherin-18, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18Q9HCL0 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC22.95■■□□□ 1.26
PCDH18Q9HCL0 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC22.95■■□□□ 1.26
PCDH18Q9HCL0 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC22.95■■□□□ 1.26
PCDH18Q9HCL0 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC22.95■■□□□ 1.26
PCDH18Q9HCL0 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC22.95■■□□□ 1.26
PCDH18Q9HCL0 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC22.95■■□□□ 1.26
PCDH18Q9HCL0 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC22.94■■□□□ 1.26
PCDH18Q9HCL0 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC22.94■■□□□ 1.26
PCDH18Q9HCL0 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
PCDH18Q9HCL0 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PCDH18Q9HCL0 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
PCDH18Q9HCL0 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
PCDH18Q9HCL0 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PCDH18Q9HCL0 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC22.94■■□□□ 1.26
PCDH18Q9HCL0 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PCDH18Q9HCL0 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PCDH18Q9HCL0 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
PCDH18Q9HCL0 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PCDH18Q9HCL0 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
PCDH18Q9HCL0 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
PCDH18Q9HCL0 GATM-206ENST00000558336 1522 ntTSL 2 BASIC22.93■■□□□ 1.26
PCDH18Q9HCL0 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
PCDH18Q9HCL0 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
PCDH18Q9HCL0 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
PCDH18Q9HCL0 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
PCDH18Q9HCL0 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
PCDH18Q9HCL0 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC22.93■■□□□ 1.26
PCDH18Q9HCL0 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC22.93■■□□□ 1.26
PCDH18Q9HCL0 SRR-208ENST00000576848 588 ntTSL 4 BASIC22.93■■□□□ 1.26
PCDH18Q9HCL0 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC22.93■■□□□ 1.26
PCDH18Q9HCL0 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC22.93■■□□□ 1.26
PCDH18Q9HCL0 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC22.93■■□□□ 1.26
PCDH18Q9HCL0 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
PCDH18Q9HCL0 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC22.93■■□□□ 1.26
PCDH18Q9HCL0 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
PCDH18Q9HCL0 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
PCDH18Q9HCL0 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC22.93■■□□□ 1.26
PCDH18Q9HCL0 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PCDH18Q9HCL0 ESRRAP2-201ENST00000418437 1549 ntBASIC22.92■■□□□ 1.26
PCDH18Q9HCL0 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC22.92■■□□□ 1.26
PCDH18Q9HCL0 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
PCDH18Q9HCL0 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
PCDH18Q9HCL0 AC006455.2-201ENST00000429931 906 ntBASIC22.92■■□□□ 1.26
PCDH18Q9HCL0 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
PCDH18Q9HCL0 AC241377.3-202ENST00000626088 1088 ntBASIC22.92■■□□□ 1.26
PCDH18Q9HCL0 AC241585.3-202ENST00000628937 1088 ntBASIC22.92■■□□□ 1.26
PCDH18Q9HCL0 AC245100.8-202ENST00000629247 1058 ntBASIC22.92■■□□□ 1.26
PCDH18Q9HCL0 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC22.92■■□□□ 1.26
PCDH18Q9HCL0 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
PCDH18Q9HCL0 AL117328.2-201ENST00000624617 1940 ntBASIC22.92■■□□□ 1.26
PCDH18Q9HCL0 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
PCDH18Q9HCL0 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC22.92■■□□□ 1.26
PCDH18Q9HCL0 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
PCDH18Q9HCL0 GTSE1-AS1-202ENST00000623117 1518 ntBASIC22.92■■□□□ 1.26
PCDH18Q9HCL0 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
PCDH18Q9HCL0 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC22.92■■□□□ 1.26
PCDH18Q9HCL0 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
PCDH18Q9HCL0 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PCDH18Q9HCL0 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC22.91■■□□□ 1.26
PCDH18Q9HCL0 AC004687.1-201ENST00000579003 1625 ntBASIC22.91■■□□□ 1.26
PCDH18Q9HCL0 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PCDH18Q9HCL0 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PCDH18Q9HCL0 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC22.91■■□□□ 1.26
PCDH18Q9HCL0 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC22.91■■□□□ 1.26
PCDH18Q9HCL0 AL499627.2-201ENST00000606283 725 ntBASIC22.91■■□□□ 1.26
PCDH18Q9HCL0 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PCDH18Q9HCL0 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC22.9■■□□□ 1.26
PCDH18Q9HCL0 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PCDH18Q9HCL0 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PCDH18Q9HCL0 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PCDH18Q9HCL0 RPP21-222ENST00000433076 577 ntTSL 2 BASIC22.9■■□□□ 1.26
PCDH18Q9HCL0 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC22.9■■□□□ 1.26
PCDH18Q9HCL0 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
PCDH18Q9HCL0 AC099791.2-201ENST00000605725 427 ntBASIC22.9■■□□□ 1.26
PCDH18Q9HCL0 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PCDH18Q9HCL0 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
PCDH18Q9HCL0 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
PCDH18Q9HCL0 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
PCDH18Q9HCL0 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC22.9■■□□□ 1.26
PCDH18Q9HCL0 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PCDH18Q9HCL0 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
PCDH18Q9HCL0 GUSBP5-202ENST00000510805 1989 ntBASIC22.89■■□□□ 1.26
PCDH18Q9HCL0 AC087742.1-201ENST00000575880 1738 ntBASIC22.89■■□□□ 1.26
PCDH18Q9HCL0 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC22.89■■□□□ 1.25
PCDH18Q9HCL0 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
PCDH18Q9HCL0 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
PCDH18Q9HCL0 TRIR-202ENST00000588213 841 ntTSL 3 BASIC22.89■■□□□ 1.25
PCDH18Q9HCL0 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC22.89■■□□□ 1.25
PCDH18Q9HCL0 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.25
PCDH18Q9HCL0 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC22.89■■□□□ 1.25
PCDH18Q9HCL0 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
PCDH18Q9HCL0 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC22.89■■□□□ 1.25
PCDH18Q9HCL0 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC22.89■■□□□ 1.25
PCDH18Q9HCL0 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC22.89■■□□□ 1.25
PCDH18Q9HCL0 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
PCDH18Q9HCL0 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.25
PCDH18Q9HCL0 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC22.88■■□□□ 1.25
PCDH18Q9HCL0 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
PCDH18Q9HCL0 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC22.88■■□□□ 1.25
PCDH18Q9HCL0 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC22.88■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms