Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC14.78□□□□□ -0.04
SND1-IT1Q9HBX3 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SND1-IT1Q9HBX3 C11orf96-202ENST00000528572 1834 ntBASIC14.78□□□□□ -0.04
SND1-IT1Q9HBX3 AC092053.2-201ENST00000640557 1818 ntBASIC14.78□□□□□ -0.04
SND1-IT1Q9HBX3 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SND1-IT1Q9HBX3 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SND1-IT1Q9HBX3 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SND1-IT1Q9HBX3 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
SND1-IT1Q9HBX3 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SND1-IT1Q9HBX3 GPX1-201ENST00000419349 1106 ntBASIC14.78□□□□□ -0.04
SND1-IT1Q9HBX3 PVT1-219ENST00000523427 938 ntTSL 3 BASIC14.78□□□□□ -0.04
SND1-IT1Q9HBX3 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SND1-IT1Q9HBX3 AC018755.3-202ENST00000596210 929 ntBASIC14.78□□□□□ -0.04
SND1-IT1Q9HBX3 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
SND1-IT1Q9HBX3 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
SND1-IT1Q9HBX3 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC14.78□□□□□ -0.04
SND1-IT1Q9HBX3 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
SND1-IT1Q9HBX3 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SND1-IT1Q9HBX3 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC14.78□□□□□ -0.04
SND1-IT1Q9HBX3 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SND1-IT1Q9HBX3 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SND1-IT1Q9HBX3 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
SND1-IT1Q9HBX3 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SND1-IT1Q9HBX3 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
SND1-IT1Q9HBX3 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SND1-IT1Q9HBX3 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC14.77□□□□□ -0.05
SND1-IT1Q9HBX3 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SND1-IT1Q9HBX3 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SND1-IT1Q9HBX3 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SND1-IT1Q9HBX3 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SND1-IT1Q9HBX3 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC14.77□□□□□ -0.05
SND1-IT1Q9HBX3 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
SND1-IT1Q9HBX3 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC14.77□□□□□ -0.05
SND1-IT1Q9HBX3 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SND1-IT1Q9HBX3 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC14.77□□□□□ -0.05
SND1-IT1Q9HBX3 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SND1-IT1Q9HBX3 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SND1-IT1Q9HBX3 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SND1-IT1Q9HBX3 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SND1-IT1Q9HBX3 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
SND1-IT1Q9HBX3 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SND1-IT1Q9HBX3 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SND1-IT1Q9HBX3 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
SND1-IT1Q9HBX3 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SND1-IT1Q9HBX3 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SND1-IT1Q9HBX3 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SND1-IT1Q9HBX3 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SND1-IT1Q9HBX3 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SND1-IT1Q9HBX3 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SND1-IT1Q9HBX3 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
SND1-IT1Q9HBX3 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SND1-IT1Q9HBX3 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SND1-IT1Q9HBX3 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
SND1-IT1Q9HBX3 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SND1-IT1Q9HBX3 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SND1-IT1Q9HBX3 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC14.76□□□□□ -0.05
SND1-IT1Q9HBX3 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SND1-IT1Q9HBX3 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SND1-IT1Q9HBX3 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SND1-IT1Q9HBX3 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
SND1-IT1Q9HBX3 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SND1-IT1Q9HBX3 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SND1-IT1Q9HBX3 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SND1-IT1Q9HBX3 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC14.75□□□□□ -0.05
SND1-IT1Q9HBX3 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SND1-IT1Q9HBX3 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
SND1-IT1Q9HBX3 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC14.75□□□□□ -0.05
SND1-IT1Q9HBX3 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
SND1-IT1Q9HBX3 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
SND1-IT1Q9HBX3 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SND1-IT1Q9HBX3 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC14.75□□□□□ -0.05
SND1-IT1Q9HBX3 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SND1-IT1Q9HBX3 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
SND1-IT1Q9HBX3 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SND1-IT1Q9HBX3 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SND1-IT1Q9HBX3 ALDH1A3-203ENST00000557963 1670 ntBASIC14.74□□□□□ -0.05
SND1-IT1Q9HBX3 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SND1-IT1Q9HBX3 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SND1-IT1Q9HBX3 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
SND1-IT1Q9HBX3 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
SND1-IT1Q9HBX3 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC14.74□□□□□ -0.05
SND1-IT1Q9HBX3 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
SND1-IT1Q9HBX3 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC14.74□□□□□ -0.05
SND1-IT1Q9HBX3 AC087393.1-201ENST00000582896 145 ntBASIC14.74□□□□□ -0.05
SND1-IT1Q9HBX3 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC14.74□□□□□ -0.05
SND1-IT1Q9HBX3 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SND1-IT1Q9HBX3 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
SND1-IT1Q9HBX3 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SND1-IT1Q9HBX3 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC14.74□□□□□ -0.05
SND1-IT1Q9HBX3 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
SND1-IT1Q9HBX3 FBXW4P1-201ENST00000426721 2239 ntBASIC14.74□□□□□ -0.05
SND1-IT1Q9HBX3 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC14.74□□□□□ -0.05
SND1-IT1Q9HBX3 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC14.74□□□□□ -0.05
SND1-IT1Q9HBX3 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
SND1-IT1Q9HBX3 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SND1-IT1Q9HBX3 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SND1-IT1Q9HBX3 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SND1-IT1Q9HBX3 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SND1-IT1Q9HBX3 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SND1-IT1Q9HBX3 EI24-204ENST00000527235 1625 ntTSL 5 BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms