Protein–RNA interactions for Protein: Q9H4B7

TUBB1, Tubulin beta-1 chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1Q9H4B7 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TUBB1Q9H4B7 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
TUBB1Q9H4B7 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TUBB1Q9H4B7 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
TUBB1Q9H4B7 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TUBB1Q9H4B7 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.41■■□□□ 1.02
TUBB1Q9H4B7 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
TUBB1Q9H4B7 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
TUBB1Q9H4B7 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
TUBB1Q9H4B7 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.41■■□□□ 1.02
TUBB1Q9H4B7 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TUBB1Q9H4B7 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.41■■□□□ 1.02
TUBB1Q9H4B7 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TUBB1Q9H4B7 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TUBB1Q9H4B7 AC092053.2-201ENST00000640557 1818 ntBASIC21.41■■□□□ 1.02
TUBB1Q9H4B7 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
TUBB1Q9H4B7 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TUBB1Q9H4B7 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.4■■□□□ 1.02
TUBB1Q9H4B7 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.4■■□□□ 1.02
TUBB1Q9H4B7 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TUBB1Q9H4B7 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.4■■□□□ 1.02
TUBB1Q9H4B7 AC005703.6-201ENST00000623265 1329 ntBASIC21.4■■□□□ 1.02
TUBB1Q9H4B7 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TUBB1Q9H4B7 LINC01529-204ENST00000636474 1715 ntBASIC21.4■■□□□ 1.02
TUBB1Q9H4B7 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
TUBB1Q9H4B7 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TUBB1Q9H4B7 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.4■■□□□ 1.02
TUBB1Q9H4B7 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.39■■□□□ 1.02
TUBB1Q9H4B7 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
TUBB1Q9H4B7 AC007375.3-201ENST00000600936 2314 ntBASIC21.39■■□□□ 1.02
TUBB1Q9H4B7 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
TUBB1Q9H4B7 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TUBB1Q9H4B7 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.39■■□□□ 1.01
TUBB1Q9H4B7 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
TUBB1Q9H4B7 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.39■■□□□ 1.01
TUBB1Q9H4B7 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
TUBB1Q9H4B7 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
TUBB1Q9H4B7 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TUBB1Q9H4B7 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.38■■□□□ 1.01
TUBB1Q9H4B7 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
TUBB1Q9H4B7 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TUBB1Q9H4B7 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
TUBB1Q9H4B7 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TUBB1Q9H4B7 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TUBB1Q9H4B7 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TUBB1Q9H4B7 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
TUBB1Q9H4B7 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
TUBB1Q9H4B7 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
TUBB1Q9H4B7 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TUBB1Q9H4B7 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
TUBB1Q9H4B7 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.37■■□□□ 1.01
TUBB1Q9H4B7 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TUBB1Q9H4B7 C11orf96-202ENST00000528572 1834 ntBASIC21.37■■□□□ 1.01
TUBB1Q9H4B7 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
TUBB1Q9H4B7 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TUBB1Q9H4B7 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TUBB1Q9H4B7 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.37■■□□□ 1.01
TUBB1Q9H4B7 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
TUBB1Q9H4B7 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
TUBB1Q9H4B7 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.37■■□□□ 1.01
TUBB1Q9H4B7 FP325331.1-202ENST00000623531 1380 ntBASIC21.36■■□□□ 1.01
TUBB1Q9H4B7 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
TUBB1Q9H4B7 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TUBB1Q9H4B7 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.36■■□□□ 1.01
TUBB1Q9H4B7 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
TUBB1Q9H4B7 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
TUBB1Q9H4B7 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.36■■□□□ 1.01
TUBB1Q9H4B7 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
TUBB1Q9H4B7 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TUBB1Q9H4B7 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TUBB1Q9H4B7 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TUBB1Q9H4B7 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TUBB1Q9H4B7 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TUBB1Q9H4B7 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
TUBB1Q9H4B7 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TUBB1Q9H4B7 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.34■■□□□ 1.01
TUBB1Q9H4B7 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TUBB1Q9H4B7 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.34■■□□□ 1.01
TUBB1Q9H4B7 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
TUBB1Q9H4B7 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TUBB1Q9H4B7 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
TUBB1Q9H4B7 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.34■■□□□ 1.01
TUBB1Q9H4B7 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TUBB1Q9H4B7 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TUBB1Q9H4B7 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TUBB1Q9H4B7 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TUBB1Q9H4B7 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TUBB1Q9H4B7 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TUBB1Q9H4B7 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
TUBB1Q9H4B7 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TUBB1Q9H4B7 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TUBB1Q9H4B7 BX664725.1-201ENST00000438252 379 ntBASIC21.33■■□□□ 1.01
TUBB1Q9H4B7 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
TUBB1Q9H4B7 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
TUBB1Q9H4B7 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
TUBB1Q9H4B7 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.32■■□□□ 1
TUBB1Q9H4B7 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TUBB1Q9H4B7 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.32■■□□□ 1
TUBB1Q9H4B7 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.32■■□□□ 1
TUBB1Q9H4B7 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms