Protein–RNA interactions for Protein: Q9H3M0

KCNF1, Potassium voltage-gated channel subfamily F member 1, humanhuman

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNF1Q9H3M0 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
KCNF1Q9H3M0 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
KCNF1Q9H3M0 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
KCNF1Q9H3M0 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC24.24■■□□□ 1.47
KCNF1Q9H3M0 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC24.24■■□□□ 1.47
KCNF1Q9H3M0 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC24.24■■□□□ 1.47
KCNF1Q9H3M0 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
KCNF1Q9H3M0 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
KCNF1Q9H3M0 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
KCNF1Q9H3M0 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
KCNF1Q9H3M0 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
KCNF1Q9H3M0 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
KCNF1Q9H3M0 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC24.23■■□□□ 1.47
KCNF1Q9H3M0 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
KCNF1Q9H3M0 AL592295.1-201ENST00000400984 884 ntBASIC24.23■■□□□ 1.47
KCNF1Q9H3M0 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
KCNF1Q9H3M0 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC24.23■■□□□ 1.47
KCNF1Q9H3M0 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
KCNF1Q9H3M0 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
KCNF1Q9H3M0 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
KCNF1Q9H3M0 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
KCNF1Q9H3M0 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC24.23■■□□□ 1.47
KCNF1Q9H3M0 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
KCNF1Q9H3M0 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC24.22■■□□□ 1.47
KCNF1Q9H3M0 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
KCNF1Q9H3M0 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC24.22■■□□□ 1.47
KCNF1Q9H3M0 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
KCNF1Q9H3M0 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
KCNF1Q9H3M0 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC24.22■■□□□ 1.47
KCNF1Q9H3M0 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
KCNF1Q9H3M0 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
KCNF1Q9H3M0 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC24.22■■□□□ 1.47
KCNF1Q9H3M0 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC24.21■■□□□ 1.47
KCNF1Q9H3M0 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
KCNF1Q9H3M0 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
KCNF1Q9H3M0 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
KCNF1Q9H3M0 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
KCNF1Q9H3M0 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
KCNF1Q9H3M0 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC24.21■■□□□ 1.47
KCNF1Q9H3M0 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC24.21■■□□□ 1.47
KCNF1Q9H3M0 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC24.21■■□□□ 1.47
KCNF1Q9H3M0 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
KCNF1Q9H3M0 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
KCNF1Q9H3M0 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
KCNF1Q9H3M0 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.47
KCNF1Q9H3M0 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
KCNF1Q9H3M0 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
KCNF1Q9H3M0 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
KCNF1Q9H3M0 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
KCNF1Q9H3M0 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
KCNF1Q9H3M0 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
KCNF1Q9H3M0 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
KCNF1Q9H3M0 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
KCNF1Q9H3M0 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
KCNF1Q9H3M0 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC24.2■■□□□ 1.46
KCNF1Q9H3M0 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC24.2■■□□□ 1.46
KCNF1Q9H3M0 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
KCNF1Q9H3M0 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
KCNF1Q9H3M0 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
KCNF1Q9H3M0 STK32C-205ENST00000456004 607 ntTSL 2 BASIC24.19■■□□□ 1.46
KCNF1Q9H3M0 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
KCNF1Q9H3M0 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC24.19■■□□□ 1.46
KCNF1Q9H3M0 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC24.18■■□□□ 1.46
KCNF1Q9H3M0 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
KCNF1Q9H3M0 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
KCNF1Q9H3M0 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
KCNF1Q9H3M0 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC24.18■■□□□ 1.46
KCNF1Q9H3M0 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
KCNF1Q9H3M0 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
KCNF1Q9H3M0 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
KCNF1Q9H3M0 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC24.18■■□□□ 1.46
KCNF1Q9H3M0 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
KCNF1Q9H3M0 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC24.17■■□□□ 1.46
KCNF1Q9H3M0 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC24.17■■□□□ 1.46
KCNF1Q9H3M0 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC24.17■■□□□ 1.46
KCNF1Q9H3M0 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC24.17■■□□□ 1.46
KCNF1Q9H3M0 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
KCNF1Q9H3M0 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
KCNF1Q9H3M0 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
KCNF1Q9H3M0 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
KCNF1Q9H3M0 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
KCNF1Q9H3M0 TPT1-202ENST00000379055 948 ntTSL 2 BASIC24.16■■□□□ 1.46
KCNF1Q9H3M0 AC022413.1-201ENST00000624602 984 ntBASIC24.16■■□□□ 1.46
KCNF1Q9H3M0 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC24.16■■□□□ 1.46
KCNF1Q9H3M0 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
KCNF1Q9H3M0 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC24.16■■□□□ 1.46
KCNF1Q9H3M0 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
KCNF1Q9H3M0 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
KCNF1Q9H3M0 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
KCNF1Q9H3M0 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
KCNF1Q9H3M0 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC24.15■■□□□ 1.46
KCNF1Q9H3M0 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC24.15■■□□□ 1.46
KCNF1Q9H3M0 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
KCNF1Q9H3M0 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC24.15■■□□□ 1.46
KCNF1Q9H3M0 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
KCNF1Q9H3M0 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
KCNF1Q9H3M0 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC24.14■■□□□ 1.46
KCNF1Q9H3M0 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.46
KCNF1Q9H3M0 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC24.14■■□□□ 1.46
KCNF1Q9H3M0 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms