Protein–RNA interactions for Protein: Q9H320

VCX, Variable charge X-linked protein 1, humanhuman

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCXQ9H320 DUX4L23-201ENST00000615195 1269 ntBASIC21.12■□□□□ 0.97
VCXQ9H320 DUX4L24-201ENST00000617576 1269 ntBASIC21.12■□□□□ 0.97
VCXQ9H320 DUX4L22-201ENST00000618238 1269 ntBASIC21.12■□□□□ 0.97
VCXQ9H320 DUX4L20-201ENST00000619712 1269 ntBASIC21.12■□□□□ 0.97
VCXQ9H320 DUX4L21-201ENST00000622058 1269 ntBASIC21.12■□□□□ 0.97
VCXQ9H320 DUX4L10-201ENST00000622460 1267 ntBASIC21.12■□□□□ 0.97
VCXQ9H320 DUX4L25-201ENST00000624915 1269 ntBASIC21.12■□□□□ 0.97
VCXQ9H320 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
VCXQ9H320 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC21.12■□□□□ 0.97
VCXQ9H320 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
VCXQ9H320 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.11■□□□□ 0.97
VCXQ9H320 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
VCXQ9H320 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
VCXQ9H320 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.11■□□□□ 0.97
VCXQ9H320 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
VCXQ9H320 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
VCXQ9H320 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
VCXQ9H320 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC21.11■□□□□ 0.97
VCXQ9H320 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.11■□□□□ 0.97
VCXQ9H320 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
VCXQ9H320 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC21.1■□□□□ 0.97
VCXQ9H320 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
VCXQ9H320 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
VCXQ9H320 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
VCXQ9H320 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.1■□□□□ 0.97
VCXQ9H320 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
VCXQ9H320 LINC01971-201ENST00000617888 1048 ntBASIC21.1■□□□□ 0.97
VCXQ9H320 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
VCXQ9H320 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
VCXQ9H320 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
VCXQ9H320 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
VCXQ9H320 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
VCXQ9H320 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
VCXQ9H320 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
VCXQ9H320 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
VCXQ9H320 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
VCXQ9H320 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
VCXQ9H320 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
VCXQ9H320 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
VCXQ9H320 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.09■□□□□ 0.97
VCXQ9H320 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.09■□□□□ 0.97
VCXQ9H320 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.09■□□□□ 0.97
VCXQ9H320 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
VCXQ9H320 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
VCXQ9H320 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.09■□□□□ 0.97
VCXQ9H320 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
VCXQ9H320 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
VCXQ9H320 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
VCXQ9H320 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.08■□□□□ 0.97
VCXQ9H320 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
VCXQ9H320 HLA-V-202ENST00000446817 847 ntBASIC21.08■□□□□ 0.97
VCXQ9H320 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
VCXQ9H320 MIR3960-201ENST00000583311 91 ntBASIC21.08■□□□□ 0.97
VCXQ9H320 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
VCXQ9H320 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
VCXQ9H320 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
VCXQ9H320 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
VCXQ9H320 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
VCXQ9H320 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
VCXQ9H320 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
VCXQ9H320 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
VCXQ9H320 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.07■□□□□ 0.96
VCXQ9H320 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.07■□□□□ 0.96
VCXQ9H320 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC21.07■□□□□ 0.96
VCXQ9H320 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
VCXQ9H320 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
VCXQ9H320 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
VCXQ9H320 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
VCXQ9H320 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
VCXQ9H320 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
VCXQ9H320 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.06■□□□□ 0.96
VCXQ9H320 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
VCXQ9H320 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
VCXQ9H320 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
VCXQ9H320 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
VCXQ9H320 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
VCXQ9H320 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
VCXQ9H320 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
VCXQ9H320 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
VCXQ9H320 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
VCXQ9H320 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21.05■□□□□ 0.96
VCXQ9H320 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.05■□□□□ 0.96
VCXQ9H320 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VCXQ9H320 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
VCXQ9H320 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VCXQ9H320 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC21.05■□□□□ 0.96
VCXQ9H320 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VCXQ9H320 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VCXQ9H320 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
VCXQ9H320 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
VCXQ9H320 AC139530.1-201ENST00000575312 1977 ntBASIC21.05■□□□□ 0.96
VCXQ9H320 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
VCXQ9H320 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
VCXQ9H320 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
VCXQ9H320 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
VCXQ9H320 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
VCXQ9H320 LINC01521-201ENST00000504184 1943 ntBASIC21.04■□□□□ 0.96
VCXQ9H320 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
VCXQ9H320 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
VCXQ9H320 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms