Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
VPS16Q9H269 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
VPS16Q9H269 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
VPS16Q9H269 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
VPS16Q9H269 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC24.32■■□□□ 1.48
VPS16Q9H269 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
VPS16Q9H269 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
VPS16Q9H269 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
VPS16Q9H269 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC24.32■■□□□ 1.48
VPS16Q9H269 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC24.32■■□□□ 1.48
VPS16Q9H269 AC139530.1-201ENST00000575312 1977 ntBASIC24.32■■□□□ 1.48
VPS16Q9H269 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
VPS16Q9H269 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
VPS16Q9H269 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
VPS16Q9H269 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
VPS16Q9H269 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
VPS16Q9H269 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC24.31■■□□□ 1.48
VPS16Q9H269 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC24.31■■□□□ 1.48
VPS16Q9H269 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC24.31■■□□□ 1.48
VPS16Q9H269 AC087742.1-201ENST00000575880 1738 ntBASIC24.31■■□□□ 1.48
VPS16Q9H269 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC24.31■■□□□ 1.48
VPS16Q9H269 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC24.31■■□□□ 1.48
VPS16Q9H269 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
VPS16Q9H269 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
VPS16Q9H269 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC24.31■■□□□ 1.48
VPS16Q9H269 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC24.31■■□□□ 1.48
VPS16Q9H269 AC021242.3-201ENST00000607598 1377 ntBASIC24.3■■□□□ 1.48
VPS16Q9H269 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
VPS16Q9H269 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
VPS16Q9H269 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC24.3■■□□□ 1.48
VPS16Q9H269 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
VPS16Q9H269 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
VPS16Q9H269 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
VPS16Q9H269 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
VPS16Q9H269 AC005703.6-201ENST00000623265 1329 ntBASIC24.3■■□□□ 1.48
VPS16Q9H269 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
VPS16Q9H269 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC24.29■■□□□ 1.48
VPS16Q9H269 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC24.29■■□□□ 1.48
VPS16Q9H269 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
VPS16Q9H269 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
VPS16Q9H269 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
VPS16Q9H269 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
VPS16Q9H269 MIR6722-201ENST00000617286 78 ntBASIC24.29■■□□□ 1.48
VPS16Q9H269 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
VPS16Q9H269 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
VPS16Q9H269 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC24.29■■□□□ 1.48
VPS16Q9H269 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
VPS16Q9H269 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
VPS16Q9H269 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
VPS16Q9H269 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
VPS16Q9H269 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
VPS16Q9H269 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC24.28■■□□□ 1.48
VPS16Q9H269 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
VPS16Q9H269 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC24.28■■□□□ 1.48
VPS16Q9H269 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
VPS16Q9H269 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
VPS16Q9H269 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
VPS16Q9H269 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
VPS16Q9H269 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
VPS16Q9H269 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC24.28■■□□□ 1.48
VPS16Q9H269 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
VPS16Q9H269 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
VPS16Q9H269 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
VPS16Q9H269 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
VPS16Q9H269 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
VPS16Q9H269 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC24.27■■□□□ 1.48
VPS16Q9H269 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
VPS16Q9H269 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC24.27■■□□□ 1.48
VPS16Q9H269 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC24.27■■□□□ 1.48
VPS16Q9H269 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
VPS16Q9H269 CLTA-206ENST00000466396 695 ntTSL 2 BASIC24.27■■□□□ 1.48
VPS16Q9H269 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC24.27■■□□□ 1.48
VPS16Q9H269 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
VPS16Q9H269 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
VPS16Q9H269 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
VPS16Q9H269 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
VPS16Q9H269 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
VPS16Q9H269 LINC01529-204ENST00000636474 1715 ntBASIC24.27■■□□□ 1.48
VPS16Q9H269 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
VPS16Q9H269 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC24.26■■□□□ 1.47
VPS16Q9H269 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
VPS16Q9H269 AC137767.1-201ENST00000602918 1920 ntBASIC24.26■■□□□ 1.47
VPS16Q9H269 ASB1-202ENST00000409297 878 ntTSL 5 BASIC24.26■■□□□ 1.47
VPS16Q9H269 BX664725.1-201ENST00000438252 379 ntBASIC24.26■■□□□ 1.47
VPS16Q9H269 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC24.26■■□□□ 1.47
VPS16Q9H269 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
VPS16Q9H269 AC092053.2-201ENST00000640557 1818 ntBASIC24.26■■□□□ 1.47
VPS16Q9H269 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC24.26■■□□□ 1.47
VPS16Q9H269 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC24.26■■□□□ 1.47
VPS16Q9H269 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
VPS16Q9H269 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
VPS16Q9H269 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC24.25■■□□□ 1.47
VPS16Q9H269 PRTG-204ENST00000561292 833 ntTSL 3 BASIC24.25■■□□□ 1.47
VPS16Q9H269 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
VPS16Q9H269 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC24.24■■□□□ 1.47
VPS16Q9H269 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
VPS16Q9H269 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
VPS16Q9H269 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
VPS16Q9H269 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC24.24■■□□□ 1.47
VPS16Q9H269 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms