Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC16.93■□□□□ 0.3
NDUFAF3Q9BU61 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
NDUFAF3Q9BU61 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NDUFAF3Q9BU61 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NDUFAF3Q9BU61 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NDUFAF3Q9BU61 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC16.93■□□□□ 0.3
NDUFAF3Q9BU61 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NDUFAF3Q9BU61 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NDUFAF3Q9BU61 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NDUFAF3Q9BU61 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC16.93■□□□□ 0.3
NDUFAF3Q9BU61 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
NDUFAF3Q9BU61 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NDUFAF3Q9BU61 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC16.92■□□□□ 0.3
NDUFAF3Q9BU61 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
NDUFAF3Q9BU61 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
NDUFAF3Q9BU61 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
NDUFAF3Q9BU61 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
NDUFAF3Q9BU61 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC16.92■□□□□ 0.3
NDUFAF3Q9BU61 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
NDUFAF3Q9BU61 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NDUFAF3Q9BU61 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NDUFAF3Q9BU61 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NDUFAF3Q9BU61 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
NDUFAF3Q9BU61 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NDUFAF3Q9BU61 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NDUFAF3Q9BU61 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC16.92■□□□□ 0.3
NDUFAF3Q9BU61 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NDUFAF3Q9BU61 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
NDUFAF3Q9BU61 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NDUFAF3Q9BU61 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NDUFAF3Q9BU61 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NDUFAF3Q9BU61 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
NDUFAF3Q9BU61 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NDUFAF3Q9BU61 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NDUFAF3Q9BU61 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC16.91■□□□□ 0.3
NDUFAF3Q9BU61 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NDUFAF3Q9BU61 AL451085.2-201ENST00000605085 799 ntBASIC16.91■□□□□ 0.3
NDUFAF3Q9BU61 AL035685.1-201ENST00000636663 812 ntBASIC16.91■□□□□ 0.3
NDUFAF3Q9BU61 AC004812.2-201ENST00000611079 2094 ntBASIC16.91■□□□□ 0.3
NDUFAF3Q9BU61 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NDUFAF3Q9BU61 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC16.91■□□□□ 0.3
NDUFAF3Q9BU61 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC16.91■□□□□ 0.3
NDUFAF3Q9BU61 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
NDUFAF3Q9BU61 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
NDUFAF3Q9BU61 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NDUFAF3Q9BU61 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NDUFAF3Q9BU61 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
NDUFAF3Q9BU61 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NDUFAF3Q9BU61 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
NDUFAF3Q9BU61 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NDUFAF3Q9BU61 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NDUFAF3Q9BU61 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NDUFAF3Q9BU61 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NDUFAF3Q9BU61 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC16.9■□□□□ 0.3
NDUFAF3Q9BU61 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC16.9■□□□□ 0.3
NDUFAF3Q9BU61 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC16.9■□□□□ 0.3
NDUFAF3Q9BU61 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC16.9■□□□□ 0.3
NDUFAF3Q9BU61 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NDUFAF3Q9BU61 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
NDUFAF3Q9BU61 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC16.9■□□□□ 0.3
NDUFAF3Q9BU61 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
NDUFAF3Q9BU61 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
NDUFAF3Q9BU61 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
NDUFAF3Q9BU61 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NDUFAF3Q9BU61 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC16.89■□□□□ 0.29
NDUFAF3Q9BU61 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NDUFAF3Q9BU61 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
NDUFAF3Q9BU61 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NDUFAF3Q9BU61 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NDUFAF3Q9BU61 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC16.89■□□□□ 0.29
NDUFAF3Q9BU61 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC16.89■□□□□ 0.29
NDUFAF3Q9BU61 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC16.89■□□□□ 0.29
NDUFAF3Q9BU61 AC087393.1-201ENST00000582896 145 ntBASIC16.89■□□□□ 0.29
NDUFAF3Q9BU61 MIR4508-201ENST00000584178 70 ntBASIC16.89■□□□□ 0.29
NDUFAF3Q9BU61 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NDUFAF3Q9BU61 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
NDUFAF3Q9BU61 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
NDUFAF3Q9BU61 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NDUFAF3Q9BU61 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC16.89■□□□□ 0.29
NDUFAF3Q9BU61 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NDUFAF3Q9BU61 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC16.88■□□□□ 0.29
NDUFAF3Q9BU61 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
NDUFAF3Q9BU61 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NDUFAF3Q9BU61 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NDUFAF3Q9BU61 IDNK-201ENST00000376417 511 ntTSL 5 BASIC16.88■□□□□ 0.29
NDUFAF3Q9BU61 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NDUFAF3Q9BU61 RPS2P7-201ENST00000447334 885 ntBASIC16.88■□□□□ 0.29
NDUFAF3Q9BU61 TRIR-205ENST00000592273 783 ntTSL 3 BASIC16.88■□□□□ 0.29
NDUFAF3Q9BU61 AC019171.1-201ENST00000601251 1056 ntBASIC16.88■□□□□ 0.29
NDUFAF3Q9BU61 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NDUFAF3Q9BU61 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC16.88■□□□□ 0.29
NDUFAF3Q9BU61 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC16.88■□□□□ 0.29
NDUFAF3Q9BU61 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NDUFAF3Q9BU61 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NDUFAF3Q9BU61 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
NDUFAF3Q9BU61 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NDUFAF3Q9BU61 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NDUFAF3Q9BU61 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NDUFAF3Q9BU61 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
NDUFAF3Q9BU61 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 350.3 ms