Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.81■■□□□ 1.08
CCM2Q9BSQ5 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCM2Q9BSQ5 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
CCM2Q9BSQ5 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCM2Q9BSQ5 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.8■■□□□ 1.08
CCM2Q9BSQ5 AC135279.3-201ENST00000610945 1311 ntBASIC21.8■■□□□ 1.08
CCM2Q9BSQ5 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CCM2Q9BSQ5 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCM2Q9BSQ5 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.8■■□□□ 1.08
CCM2Q9BSQ5 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCM2Q9BSQ5 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCM2Q9BSQ5 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCM2Q9BSQ5 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.8■■□□□ 1.08
CCM2Q9BSQ5 AC133561.4-201ENST00000566112 224 ntBASIC21.8■■□□□ 1.08
CCM2Q9BSQ5 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
CCM2Q9BSQ5 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCM2Q9BSQ5 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
CCM2Q9BSQ5 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.79■■□□□ 1.08
CCM2Q9BSQ5 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CCM2Q9BSQ5 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCM2Q9BSQ5 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC21.79■■□□□ 1.08
CCM2Q9BSQ5 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCM2Q9BSQ5 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCM2Q9BSQ5 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.79■■□□□ 1.08
CCM2Q9BSQ5 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CCM2Q9BSQ5 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.78■■□□□ 1.08
CCM2Q9BSQ5 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCM2Q9BSQ5 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.78■■□□□ 1.08
CCM2Q9BSQ5 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCM2Q9BSQ5 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC21.78■■□□□ 1.08
CCM2Q9BSQ5 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.78■■□□□ 1.08
CCM2Q9BSQ5 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.78■■□□□ 1.08
CCM2Q9BSQ5 AC024257.2-201ENST00000549699 147 ntBASIC21.78■■□□□ 1.08
CCM2Q9BSQ5 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
CCM2Q9BSQ5 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.78■■□□□ 1.08
CCM2Q9BSQ5 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.78■■□□□ 1.08
CCM2Q9BSQ5 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCM2Q9BSQ5 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.78■■□□□ 1.08
CCM2Q9BSQ5 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCM2Q9BSQ5 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCM2Q9BSQ5 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
CCM2Q9BSQ5 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCM2Q9BSQ5 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.77■■□□□ 1.08
CCM2Q9BSQ5 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCM2Q9BSQ5 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC21.77■■□□□ 1.08
CCM2Q9BSQ5 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.77■■□□□ 1.08
CCM2Q9BSQ5 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC21.77■■□□□ 1.08
CCM2Q9BSQ5 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCM2Q9BSQ5 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
CCM2Q9BSQ5 AC136469.2-201ENST00000623944 1028 ntBASIC21.77■■□□□ 1.08
CCM2Q9BSQ5 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
CCM2Q9BSQ5 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.08
CCM2Q9BSQ5 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
CCM2Q9BSQ5 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.07
CCM2Q9BSQ5 AC004687.1-201ENST00000579003 1625 ntBASIC21.77■■□□□ 1.07
CCM2Q9BSQ5 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CCM2Q9BSQ5 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCM2Q9BSQ5 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.76■■□□□ 1.07
CCM2Q9BSQ5 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC21.76■■□□□ 1.07
CCM2Q9BSQ5 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCM2Q9BSQ5 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CCM2Q9BSQ5 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.75■■□□□ 1.07
CCM2Q9BSQ5 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
CCM2Q9BSQ5 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
CCM2Q9BSQ5 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
CCM2Q9BSQ5 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CCM2Q9BSQ5 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCM2Q9BSQ5 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CCM2Q9BSQ5 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCM2Q9BSQ5 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCM2Q9BSQ5 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCM2Q9BSQ5 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCM2Q9BSQ5 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.74■■□□□ 1.07
CCM2Q9BSQ5 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CCM2Q9BSQ5 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCM2Q9BSQ5 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.74■■□□□ 1.07
CCM2Q9BSQ5 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CCM2Q9BSQ5 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.74■■□□□ 1.07
CCM2Q9BSQ5 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.74■■□□□ 1.07
CCM2Q9BSQ5 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.74■■□□□ 1.07
CCM2Q9BSQ5 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CCM2Q9BSQ5 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCM2Q9BSQ5 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCM2Q9BSQ5 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.74■■□□□ 1.07
CCM2Q9BSQ5 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCM2Q9BSQ5 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCM2Q9BSQ5 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.74■■□□□ 1.07
CCM2Q9BSQ5 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCM2Q9BSQ5 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.73■■□□□ 1.07
CCM2Q9BSQ5 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
CCM2Q9BSQ5 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCM2Q9BSQ5 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
CCM2Q9BSQ5 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCM2Q9BSQ5 EDA-201ENST00000338901 1233 ntBASIC21.73■■□□□ 1.07
CCM2Q9BSQ5 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CCM2Q9BSQ5 MIR4767-201ENST00000582827 78 ntBASIC21.73■■□□□ 1.07
CCM2Q9BSQ5 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.73■■□□□ 1.07
CCM2Q9BSQ5 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCM2Q9BSQ5 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.72■■□□□ 1.07
CCM2Q9BSQ5 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms