Protein–RNA interactions for Protein: Q99731

CCL19, C-C motif chemokine 19, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL19Q99731 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCL19Q99731 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.84■□□□□ 0.61
CCL19Q99731 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.84■□□□□ 0.61
CCL19Q99731 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.84■□□□□ 0.61
CCL19Q99731 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.84■□□□□ 0.61
CCL19Q99731 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.84■□□□□ 0.61
CCL19Q99731 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCL19Q99731 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCL19Q99731 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC18.84■□□□□ 0.61
CCL19Q99731 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CCL19Q99731 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CCL19Q99731 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCL19Q99731 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.83■□□□□ 0.61
CCL19Q99731 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCL19Q99731 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCL19Q99731 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CCL19Q99731 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCL19Q99731 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CCL19Q99731 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCL19Q99731 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.83■□□□□ 0.6
CCL19Q99731 AC080038.1-201ENST00000611274 1154 ntBASIC18.83■□□□□ 0.6
CCL19Q99731 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC18.83■□□□□ 0.6
CCL19Q99731 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC18.83■□□□□ 0.6
CCL19Q99731 RARA-203ENST00000394086 2008 ntTSL 2 BASIC18.83■□□□□ 0.6
CCL19Q99731 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CCL19Q99731 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCL19Q99731 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC18.82■□□□□ 0.6
CCL19Q99731 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CCL19Q99731 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCL19Q99731 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.82■□□□□ 0.6
CCL19Q99731 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.82■□□□□ 0.6
CCL19Q99731 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC18.82■□□□□ 0.6
CCL19Q99731 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCL19Q99731 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCL19Q99731 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.82■□□□□ 0.6
CCL19Q99731 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCL19Q99731 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCL19Q99731 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.81■□□□□ 0.6
CCL19Q99731 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCL19Q99731 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCL19Q99731 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCL19Q99731 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.81■□□□□ 0.6
CCL19Q99731 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.81■□□□□ 0.6
CCL19Q99731 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.81■□□□□ 0.6
CCL19Q99731 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCL19Q99731 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCL19Q99731 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CCL19Q99731 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
CCL19Q99731 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCL19Q99731 EI24-213ENST00000618552 1747 ntTSL 5 BASIC18.8■□□□□ 0.6
CCL19Q99731 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCL19Q99731 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCL19Q99731 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.8■□□□□ 0.6
CCL19Q99731 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.8■□□□□ 0.6
CCL19Q99731 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCL19Q99731 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCL19Q99731 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.8■□□□□ 0.6
CCL19Q99731 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.8■□□□□ 0.6
CCL19Q99731 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.8■□□□□ 0.6
CCL19Q99731 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCL19Q99731 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCL19Q99731 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CCL19Q99731 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCL19Q99731 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CCL19Q99731 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CCL19Q99731 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
CCL19Q99731 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCL19Q99731 AC006015.1-201ENST00000429970 570 ntBASIC18.79■□□□□ 0.6
CCL19Q99731 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCL19Q99731 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.79■□□□□ 0.6
CCL19Q99731 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
CCL19Q99731 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.79■□□□□ 0.6
CCL19Q99731 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
CCL19Q99731 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC18.79■□□□□ 0.6
CCL19Q99731 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCL19Q99731 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CCL19Q99731 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCL19Q99731 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCL19Q99731 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CCL19Q99731 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CCL19Q99731 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.78■□□□□ 0.6
CCL19Q99731 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.78■□□□□ 0.6
CCL19Q99731 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.78■□□□□ 0.6
CCL19Q99731 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.78■□□□□ 0.6
CCL19Q99731 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.78■□□□□ 0.6
CCL19Q99731 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.78■□□□□ 0.6
CCL19Q99731 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCL19Q99731 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.78■□□□□ 0.6
CCL19Q99731 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCL19Q99731 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCL19Q99731 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCL19Q99731 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCL19Q99731 SHD-204ENST00000599689 1729 ntTSL 5 BASIC18.77■□□□□ 0.6
CCL19Q99731 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCL19Q99731 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCL19Q99731 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCL19Q99731 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CCL19Q99731 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCL19Q99731 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.77■□□□□ 0.6
CCL19Q99731 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms