Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC26.24■■□□□ 1.79
NEK1Q96PY6 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
NEK1Q96PY6 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC26.24■■□□□ 1.79
NEK1Q96PY6 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC26.24■■□□□ 1.79
NEK1Q96PY6 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
NEK1Q96PY6 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
NEK1Q96PY6 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC26.24■■□□□ 1.79
NEK1Q96PY6 GTSE1-AS1-202ENST00000623117 1518 ntBASIC26.24■■□□□ 1.79
NEK1Q96PY6 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
NEK1Q96PY6 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
NEK1Q96PY6 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
NEK1Q96PY6 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
NEK1Q96PY6 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
NEK1Q96PY6 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
NEK1Q96PY6 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
NEK1Q96PY6 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC26.23■■□□□ 1.79
NEK1Q96PY6 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
NEK1Q96PY6 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
NEK1Q96PY6 TRIR-202ENST00000588213 841 ntTSL 3 BASIC26.23■■□□□ 1.79
NEK1Q96PY6 AC099791.2-201ENST00000605725 427 ntBASIC26.23■■□□□ 1.79
NEK1Q96PY6 AL499627.2-201ENST00000606283 725 ntBASIC26.23■■□□□ 1.79
NEK1Q96PY6 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
NEK1Q96PY6 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
NEK1Q96PY6 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
NEK1Q96PY6 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
NEK1Q96PY6 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
NEK1Q96PY6 TERT-206ENST00000508104 2486 ntTSL 5 BASIC26.23■■□□□ 1.79
NEK1Q96PY6 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC26.22■■□□□ 1.79
NEK1Q96PY6 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
NEK1Q96PY6 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
NEK1Q96PY6 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
NEK1Q96PY6 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC26.22■■□□□ 1.79
NEK1Q96PY6 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
NEK1Q96PY6 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
NEK1Q96PY6 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC26.22■■□□□ 1.79
NEK1Q96PY6 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
NEK1Q96PY6 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC26.22■■□□□ 1.79
NEK1Q96PY6 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
NEK1Q96PY6 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC26.22■■□□□ 1.79
NEK1Q96PY6 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC26.22■■□□□ 1.79
NEK1Q96PY6 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
NEK1Q96PY6 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC26.21■■□□□ 1.79
NEK1Q96PY6 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC26.21■■□□□ 1.79
NEK1Q96PY6 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
NEK1Q96PY6 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
NEK1Q96PY6 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC26.21■■□□□ 1.79
NEK1Q96PY6 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC26.21■■□□□ 1.79
NEK1Q96PY6 AC006455.2-201ENST00000429931 906 ntBASIC26.21■■□□□ 1.79
NEK1Q96PY6 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC26.21■■□□□ 1.79
NEK1Q96PY6 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
NEK1Q96PY6 MIR4466-201ENST00000606121 54 ntBASIC26.21■■□□□ 1.79
NEK1Q96PY6 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC26.21■■□□□ 1.79
NEK1Q96PY6 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
NEK1Q96PY6 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
NEK1Q96PY6 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC26.21■■□□□ 1.79
NEK1Q96PY6 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
NEK1Q96PY6 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
NEK1Q96PY6 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
NEK1Q96PY6 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
NEK1Q96PY6 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.79
NEK1Q96PY6 ESRRAP2-201ENST00000418437 1549 ntBASIC26.2■■□□□ 1.79
NEK1Q96PY6 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC26.2■■□□□ 1.79
NEK1Q96PY6 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
NEK1Q96PY6 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
NEK1Q96PY6 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC26.2■■□□□ 1.78
NEK1Q96PY6 SRD5A1P1-201ENST00000442297 786 ntBASIC26.2■■□□□ 1.78
NEK1Q96PY6 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
NEK1Q96PY6 AC004687.1-201ENST00000579003 1625 ntBASIC26.2■■□□□ 1.78
NEK1Q96PY6 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
NEK1Q96PY6 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC26.19■■□□□ 1.78
NEK1Q96PY6 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC26.19■■□□□ 1.78
NEK1Q96PY6 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC26.19■■□□□ 1.78
NEK1Q96PY6 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC26.19■■□□□ 1.78
NEK1Q96PY6 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
NEK1Q96PY6 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
NEK1Q96PY6 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
NEK1Q96PY6 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
NEK1Q96PY6 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC26.19■■□□□ 1.78
NEK1Q96PY6 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
NEK1Q96PY6 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC26.19■■□□□ 1.78
NEK1Q96PY6 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
NEK1Q96PY6 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
NEK1Q96PY6 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
NEK1Q96PY6 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
NEK1Q96PY6 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
NEK1Q96PY6 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
NEK1Q96PY6 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
NEK1Q96PY6 AC131281.2-201ENST00000520478 145 ntBASIC26.18■■□□□ 1.78
NEK1Q96PY6 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
NEK1Q96PY6 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC26.18■■□□□ 1.78
NEK1Q96PY6 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
NEK1Q96PY6 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
NEK1Q96PY6 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
NEK1Q96PY6 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
NEK1Q96PY6 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
NEK1Q96PY6 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
NEK1Q96PY6 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC26.17■■□□□ 1.78
NEK1Q96PY6 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC26.17■■□□□ 1.78
NEK1Q96PY6 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC26.17■■□□□ 1.78
NEK1Q96PY6 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC26.17■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms