Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC18.46■□□□□ 0.55
GAFA1Q96PS6 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
GAFA1Q96PS6 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
GAFA1Q96PS6 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
GAFA1Q96PS6 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
GAFA1Q96PS6 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
GAFA1Q96PS6 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.45■□□□□ 0.54
GAFA1Q96PS6 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
GAFA1Q96PS6 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
GAFA1Q96PS6 HES6-206ENST00000409574 738 ntTSL 2 BASIC18.45■□□□□ 0.54
GAFA1Q96PS6 AC096631.2-201ENST00000436136 790 ntBASIC18.45■□□□□ 0.54
GAFA1Q96PS6 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
GAFA1Q96PS6 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC18.45■□□□□ 0.54
GAFA1Q96PS6 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
GAFA1Q96PS6 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
GAFA1Q96PS6 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
GAFA1Q96PS6 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
GAFA1Q96PS6 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
GAFA1Q96PS6 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC18.45■□□□□ 0.54
GAFA1Q96PS6 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC18.45■□□□□ 0.54
GAFA1Q96PS6 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
GAFA1Q96PS6 GCA-201ENST00000233612 1694 ntTSL 2 BASIC18.44■□□□□ 0.54
GAFA1Q96PS6 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.44■□□□□ 0.54
GAFA1Q96PS6 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.44■□□□□ 0.54
GAFA1Q96PS6 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
GAFA1Q96PS6 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
GAFA1Q96PS6 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
GAFA1Q96PS6 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC18.44■□□□□ 0.54
GAFA1Q96PS6 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
GAFA1Q96PS6 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
GAFA1Q96PS6 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
GAFA1Q96PS6 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
GAFA1Q96PS6 AC011298.3-201ENST00000615796 283 ntBASIC18.44■□□□□ 0.54
GAFA1Q96PS6 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
GAFA1Q96PS6 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
GAFA1Q96PS6 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
GAFA1Q96PS6 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
GAFA1Q96PS6 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
GAFA1Q96PS6 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
GAFA1Q96PS6 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
GAFA1Q96PS6 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
GAFA1Q96PS6 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
GAFA1Q96PS6 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC18.43■□□□□ 0.54
GAFA1Q96PS6 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
GAFA1Q96PS6 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC18.43■□□□□ 0.54
GAFA1Q96PS6 AL136162.1-201ENST00000607711 1078 ntBASIC18.43■□□□□ 0.54
GAFA1Q96PS6 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
GAFA1Q96PS6 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
GAFA1Q96PS6 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
GAFA1Q96PS6 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
GAFA1Q96PS6 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
GAFA1Q96PS6 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC18.42■□□□□ 0.54
GAFA1Q96PS6 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.42■□□□□ 0.54
GAFA1Q96PS6 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
GAFA1Q96PS6 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC18.42■□□□□ 0.54
GAFA1Q96PS6 AC136469.2-201ENST00000623944 1028 ntBASIC18.42■□□□□ 0.54
GAFA1Q96PS6 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
GAFA1Q96PS6 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
GAFA1Q96PS6 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC18.42■□□□□ 0.54
GAFA1Q96PS6 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
GAFA1Q96PS6 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
GAFA1Q96PS6 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC18.41■□□□□ 0.54
GAFA1Q96PS6 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC18.41■□□□□ 0.54
GAFA1Q96PS6 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC18.41■□□□□ 0.54
GAFA1Q96PS6 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC18.41■□□□□ 0.54
GAFA1Q96PS6 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC18.41■□□□□ 0.54
GAFA1Q96PS6 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
GAFA1Q96PS6 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
GAFA1Q96PS6 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
GAFA1Q96PS6 PTMA-205ENST00000410064 814 ntTSL 2 BASIC18.41■□□□□ 0.54
GAFA1Q96PS6 AC024257.2-201ENST00000549699 147 ntBASIC18.41■□□□□ 0.54
GAFA1Q96PS6 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
GAFA1Q96PS6 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.41■□□□□ 0.54
GAFA1Q96PS6 AC110285.6-201ENST00000617652 491 ntBASIC18.41■□□□□ 0.54
GAFA1Q96PS6 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
GAFA1Q96PS6 AC068473.5-201ENST00000616428 2072 ntBASIC18.41■□□□□ 0.54
GAFA1Q96PS6 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
GAFA1Q96PS6 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
GAFA1Q96PS6 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC18.41■□□□□ 0.54
GAFA1Q96PS6 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
GAFA1Q96PS6 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
GAFA1Q96PS6 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
GAFA1Q96PS6 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
GAFA1Q96PS6 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
GAFA1Q96PS6 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC18.4■□□□□ 0.54
GAFA1Q96PS6 NALT1-201ENST00000429224 738 ntTSL 5 BASIC18.4■□□□□ 0.54
GAFA1Q96PS6 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.4■□□□□ 0.54
GAFA1Q96PS6 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC18.4■□□□□ 0.54
GAFA1Q96PS6 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
GAFA1Q96PS6 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC18.4■□□□□ 0.54
GAFA1Q96PS6 AC135279.3-201ENST00000610945 1311 ntBASIC18.4■□□□□ 0.54
GAFA1Q96PS6 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
GAFA1Q96PS6 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
GAFA1Q96PS6 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
GAFA1Q96PS6 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
GAFA1Q96PS6 COMT-203ENST00000403184 2217 ntTSL 2 BASIC18.39■□□□□ 0.54
GAFA1Q96PS6 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.54
GAFA1Q96PS6 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.54
GAFA1Q96PS6 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC18.39■□□□□ 0.53
GAFA1Q96PS6 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms