Protein–RNA interactions for Protein: Q969V3

NCLN, Nicalin, humanhuman

Predictions only

Length 563 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLNQ969V3 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
NCLNQ969V3 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
NCLNQ969V3 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
NCLNQ969V3 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
NCLNQ969V3 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
NCLNQ969V3 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
NCLNQ969V3 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.34■■□□□ 1.01
NCLNQ969V3 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
NCLNQ969V3 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.34■■□□□ 1.01
NCLNQ969V3 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
NCLNQ969V3 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC21.34■■□□□ 1.01
NCLNQ969V3 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
NCLNQ969V3 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.34■■□□□ 1.01
NCLNQ969V3 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
NCLNQ969V3 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
NCLNQ969V3 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.34■■□□□ 1.01
NCLNQ969V3 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
NCLNQ969V3 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.33■■□□□ 1.01
NCLNQ969V3 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.33■■□□□ 1.01
NCLNQ969V3 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.33■■□□□ 1.01
NCLNQ969V3 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
NCLNQ969V3 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.33■■□□□ 1.01
NCLNQ969V3 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.33■■□□□ 1.01
NCLNQ969V3 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.33■■□□□ 1.01
NCLNQ969V3 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.33■■□□□ 1.01
NCLNQ969V3 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
NCLNQ969V3 AL117332.1-201ENST00000622628 974 ntBASIC21.33■■□□□ 1.01
NCLNQ969V3 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.33■■□□□ 1
NCLNQ969V3 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.33■■□□□ 1
NCLNQ969V3 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
NCLNQ969V3 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.33■■□□□ 1
NCLNQ969V3 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.32■■□□□ 1
NCLNQ969V3 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NCLNQ969V3 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
NCLNQ969V3 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.32■■□□□ 1
NCLNQ969V3 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC21.32■■□□□ 1
NCLNQ969V3 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.32■■□□□ 1
NCLNQ969V3 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NCLNQ969V3 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.32■■□□□ 1
NCLNQ969V3 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.32■■□□□ 1
NCLNQ969V3 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
NCLNQ969V3 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.32■■□□□ 1
NCLNQ969V3 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NCLNQ969V3 LINC00565-201ENST00000562710 2331 ntBASIC21.32■■□□□ 1
NCLNQ969V3 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
NCLNQ969V3 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC21.31■■□□□ 1
NCLNQ969V3 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
NCLNQ969V3 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.31■■□□□ 1
NCLNQ969V3 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.31■■□□□ 1
NCLNQ969V3 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.31■■□□□ 1
NCLNQ969V3 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.31■■□□□ 1
NCLNQ969V3 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.31■■□□□ 1
NCLNQ969V3 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
NCLNQ969V3 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NCLNQ969V3 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.31■■□□□ 1
NCLNQ969V3 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
NCLNQ969V3 GUSBP5-202ENST00000510805 1989 ntBASIC21.3■■□□□ 1
NCLNQ969V3 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.3■■□□□ 1
NCLNQ969V3 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.3■■□□□ 1
NCLNQ969V3 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.3■■□□□ 1
NCLNQ969V3 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
NCLNQ969V3 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.3■■□□□ 1
NCLNQ969V3 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NCLNQ969V3 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC21.3■■□□□ 1
NCLNQ969V3 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.3■■□□□ 1
NCLNQ969V3 AL356740.2-201ENST00000601559 647 ntBASIC21.3■■□□□ 1
NCLNQ969V3 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
NCLNQ969V3 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.3■■□□□ 1
NCLNQ969V3 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NCLNQ969V3 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC21.3■■□□□ 1
NCLNQ969V3 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NCLNQ969V3 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
NCLNQ969V3 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NCLNQ969V3 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
NCLNQ969V3 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.29■■□□□ 1
NCLNQ969V3 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.29■■□□□ 1
NCLNQ969V3 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.29■■□□□ 1
NCLNQ969V3 MIR3621-201ENST00000580529 85 ntBASIC21.29■■□□□ 1
NCLNQ969V3 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.28■■□□□ 1
NCLNQ969V3 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.28■■□□□ 1
NCLNQ969V3 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NCLNQ969V3 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NCLNQ969V3 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NCLNQ969V3 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.28■■□□□ 1
NCLNQ969V3 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.28■■□□□ 1
NCLNQ969V3 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC21.28■■□□□ 1
NCLNQ969V3 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.28■■□□□ 1
NCLNQ969V3 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
NCLNQ969V3 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NCLNQ969V3 AC005703.6-201ENST00000623265 1329 ntBASIC21.28■■□□□ 1
NCLNQ969V3 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NCLNQ969V3 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.28■■□□□ 1
NCLNQ969V3 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
NCLNQ969V3 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
NCLNQ969V3 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NCLNQ969V3 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
NCLNQ969V3 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.27■■□□□ 1
NCLNQ969V3 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.27■■□□□ 1
NCLNQ969V3 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.27■■□□□ 1
NCLNQ969V3 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC21.27■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms