Protein–RNA interactions for Protein: Q969M7

UBE2F, NEDD8-conjugating enzyme UBE2F, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2FQ969M7 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
UBE2FQ969M7 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
UBE2FQ969M7 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
UBE2FQ969M7 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
UBE2FQ969M7 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
UBE2FQ969M7 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
UBE2FQ969M7 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
UBE2FQ969M7 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.19■□□□□ 0.82
UBE2FQ969M7 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.19■□□□□ 0.82
UBE2FQ969M7 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
UBE2FQ969M7 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.18■□□□□ 0.82
UBE2FQ969M7 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.18■□□□□ 0.82
UBE2FQ969M7 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
UBE2FQ969M7 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBE2FQ969M7 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.18■□□□□ 0.82
UBE2FQ969M7 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBE2FQ969M7 FAM99A-202ENST00000538190 1989 ntBASIC20.17■□□□□ 0.82
UBE2FQ969M7 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
UBE2FQ969M7 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.17■□□□□ 0.82
UBE2FQ969M7 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
UBE2FQ969M7 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
UBE2FQ969M7 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC20.17■□□□□ 0.82
UBE2FQ969M7 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
UBE2FQ969M7 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
UBE2FQ969M7 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.17■□□□□ 0.82
UBE2FQ969M7 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
UBE2FQ969M7 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
UBE2FQ969M7 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.17■□□□□ 0.82
UBE2FQ969M7 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
UBE2FQ969M7 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
UBE2FQ969M7 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
UBE2FQ969M7 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
UBE2FQ969M7 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
UBE2FQ969M7 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.16■□□□□ 0.82
UBE2FQ969M7 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
UBE2FQ969M7 AC005229.4-201ENST00000610085 2198 ntBASIC20.16■□□□□ 0.82
UBE2FQ969M7 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
UBE2FQ969M7 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.15■□□□□ 0.82
UBE2FQ969M7 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
UBE2FQ969M7 AC011551.1-201ENST00000614101 683 ntBASIC20.15■□□□□ 0.82
UBE2FQ969M7 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
UBE2FQ969M7 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.15■□□□□ 0.82
UBE2FQ969M7 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
UBE2FQ969M7 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.15■□□□□ 0.82
UBE2FQ969M7 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
UBE2FQ969M7 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.14■□□□□ 0.82
UBE2FQ969M7 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
UBE2FQ969M7 AC010542.4-201ENST00000563151 1910 ntBASIC20.14■□□□□ 0.81
UBE2FQ969M7 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
UBE2FQ969M7 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
UBE2FQ969M7 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.14■□□□□ 0.81
UBE2FQ969M7 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.14■□□□□ 0.81
UBE2FQ969M7 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
UBE2FQ969M7 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
UBE2FQ969M7 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.14■□□□□ 0.81
UBE2FQ969M7 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
UBE2FQ969M7 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.14■□□□□ 0.81
UBE2FQ969M7 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
UBE2FQ969M7 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
UBE2FQ969M7 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
UBE2FQ969M7 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
UBE2FQ969M7 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
UBE2FQ969M7 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
UBE2FQ969M7 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
UBE2FQ969M7 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.13■□□□□ 0.81
UBE2FQ969M7 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
UBE2FQ969M7 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
UBE2FQ969M7 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.13■□□□□ 0.81
UBE2FQ969M7 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
UBE2FQ969M7 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
UBE2FQ969M7 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
UBE2FQ969M7 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.13■□□□□ 0.81
UBE2FQ969M7 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.13■□□□□ 0.81
UBE2FQ969M7 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
UBE2FQ969M7 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.13■□□□□ 0.81
UBE2FQ969M7 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
UBE2FQ969M7 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.13■□□□□ 0.81
UBE2FQ969M7 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.13■□□□□ 0.81
UBE2FQ969M7 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
UBE2FQ969M7 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
UBE2FQ969M7 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
UBE2FQ969M7 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
UBE2FQ969M7 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
UBE2FQ969M7 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.12■□□□□ 0.81
UBE2FQ969M7 AC012354.3-201ENST00000623734 483 ntBASIC20.12■□□□□ 0.81
UBE2FQ969M7 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
UBE2FQ969M7 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.12■□□□□ 0.81
UBE2FQ969M7 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
UBE2FQ969M7 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
UBE2FQ969M7 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
UBE2FQ969M7 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.11■□□□□ 0.81
UBE2FQ969M7 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
UBE2FQ969M7 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.11■□□□□ 0.81
UBE2FQ969M7 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
UBE2FQ969M7 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.11■□□□□ 0.81
UBE2FQ969M7 AC073130.3-201ENST00000624389 2278 ntBASIC20.11■□□□□ 0.81
UBE2FQ969M7 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
UBE2FQ969M7 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
UBE2FQ969M7 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.11■□□□□ 0.81
UBE2FQ969M7 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms