Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.01■□□□□ 0.79
HPS1Q92902 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HPS1Q92902 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.01■□□□□ 0.79
HPS1Q92902 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HPS1Q92902 AC131212.1-201ENST00000613771 668 ntBASIC20.01■□□□□ 0.79
HPS1Q92902 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HPS1Q92902 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
HPS1Q92902 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
HPS1Q92902 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HPS1Q92902 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.01■□□□□ 0.79
HPS1Q92902 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
HPS1Q92902 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
HPS1Q92902 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HPS1Q92902 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
HPS1Q92902 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
HPS1Q92902 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HPS1Q92902 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
HPS1Q92902 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20■□□□□ 0.79
HPS1Q92902 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20■□□□□ 0.79
HPS1Q92902 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
HPS1Q92902 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HPS1Q92902 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HPS1Q92902 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20■□□□□ 0.79
HPS1Q92902 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20■□□□□ 0.79
HPS1Q92902 AC239859.2-201ENST00000444165 318 ntBASIC20■□□□□ 0.79
HPS1Q92902 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HPS1Q92902 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20■□□□□ 0.79
HPS1Q92902 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
HPS1Q92902 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
HPS1Q92902 SLC6A10P-202ENST00000431994 2058 ntBASIC19.99■□□□□ 0.79
HPS1Q92902 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HPS1Q92902 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
HPS1Q92902 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
HPS1Q92902 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HPS1Q92902 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
HPS1Q92902 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.99■□□□□ 0.79
HPS1Q92902 THA1P-201ENST00000590384 1145 ntBASIC19.99■□□□□ 0.79
HPS1Q92902 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HPS1Q92902 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HPS1Q92902 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
HPS1Q92902 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HPS1Q92902 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
HPS1Q92902 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HPS1Q92902 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HPS1Q92902 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HPS1Q92902 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.98■□□□□ 0.79
HPS1Q92902 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
HPS1Q92902 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HPS1Q92902 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
HPS1Q92902 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
HPS1Q92902 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HPS1Q92902 AL592295.1-201ENST00000400984 884 ntBASIC19.98■□□□□ 0.79
HPS1Q92902 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
HPS1Q92902 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HPS1Q92902 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HPS1Q92902 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
HPS1Q92902 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HPS1Q92902 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.98■□□□□ 0.79
HPS1Q92902 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.98■□□□□ 0.79
HPS1Q92902 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HPS1Q92902 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
HPS1Q92902 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HPS1Q92902 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
HPS1Q92902 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
HPS1Q92902 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.97■□□□□ 0.79
HPS1Q92902 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
HPS1Q92902 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.97■□□□□ 0.79
HPS1Q92902 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.97■□□□□ 0.79
HPS1Q92902 AL356441.2-201ENST00000443009 864 ntBASIC19.97■□□□□ 0.79
HPS1Q92902 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.97■□□□□ 0.79
HPS1Q92902 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.97■□□□□ 0.79
HPS1Q92902 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HPS1Q92902 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
HPS1Q92902 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.97■□□□□ 0.79
HPS1Q92902 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
HPS1Q92902 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
HPS1Q92902 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.96■□□□□ 0.79
HPS1Q92902 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
HPS1Q92902 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HPS1Q92902 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
HPS1Q92902 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
HPS1Q92902 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.96■□□□□ 0.79
HPS1Q92902 KRT18P24-201ENST00000344739 1156 ntBASIC19.96■□□□□ 0.79
HPS1Q92902 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.96■□□□□ 0.79
HPS1Q92902 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HPS1Q92902 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
HPS1Q92902 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HPS1Q92902 KRT125P-201ENST00000546827 989 ntBASIC19.96■□□□□ 0.79
HPS1Q92902 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HPS1Q92902 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC19.96■□□□□ 0.79
HPS1Q92902 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.96■□□□□ 0.79
HPS1Q92902 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
HPS1Q92902 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.96■□□□□ 0.79
HPS1Q92902 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
HPS1Q92902 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HPS1Q92902 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HPS1Q92902 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HPS1Q92902 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
HPS1Q92902 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HPS1Q92902 BX664725.1-201ENST00000438252 379 ntBASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms