Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
NPIPB3Q92617 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NPIPB3Q92617 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC17.44■□□□□ 0.38
NPIPB3Q92617 AC144652.1-201ENST00000609974 1624 ntBASIC17.44■□□□□ 0.38
NPIPB3Q92617 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC17.44■□□□□ 0.38
NPIPB3Q92617 TK2-202ENST00000417693 1046 ntTSL 2 BASIC17.44■□□□□ 0.38
NPIPB3Q92617 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC17.44■□□□□ 0.38
NPIPB3Q92617 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC17.44■□□□□ 0.38
NPIPB3Q92617 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC17.44■□□□□ 0.38
NPIPB3Q92617 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
NPIPB3Q92617 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
NPIPB3Q92617 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC17.44■□□□□ 0.38
NPIPB3Q92617 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
NPIPB3Q92617 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NPIPB3Q92617 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NPIPB3Q92617 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC17.43■□□□□ 0.38
NPIPB3Q92617 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NPIPB3Q92617 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NPIPB3Q92617 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NPIPB3Q92617 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NPIPB3Q92617 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC17.43■□□□□ 0.38
NPIPB3Q92617 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
NPIPB3Q92617 AC103724.3-201ENST00000564481 992 ntBASIC17.43■□□□□ 0.38
NPIPB3Q92617 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC17.43■□□□□ 0.38
NPIPB3Q92617 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NPIPB3Q92617 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC17.42■□□□□ 0.38
NPIPB3Q92617 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
NPIPB3Q92617 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC17.42■□□□□ 0.38
NPIPB3Q92617 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NPIPB3Q92617 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
NPIPB3Q92617 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
NPIPB3Q92617 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NPIPB3Q92617 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC17.42■□□□□ 0.38
NPIPB3Q92617 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC17.42■□□□□ 0.38
NPIPB3Q92617 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC17.42■□□□□ 0.38
NPIPB3Q92617 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
NPIPB3Q92617 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NPIPB3Q92617 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
NPIPB3Q92617 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC17.42■□□□□ 0.38
NPIPB3Q92617 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
NPIPB3Q92617 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NPIPB3Q92617 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NPIPB3Q92617 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
NPIPB3Q92617 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NPIPB3Q92617 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
NPIPB3Q92617 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC17.41■□□□□ 0.38
NPIPB3Q92617 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC17.41■□□□□ 0.38
NPIPB3Q92617 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NPIPB3Q92617 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
NPIPB3Q92617 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NPIPB3Q92617 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC17.41■□□□□ 0.38
NPIPB3Q92617 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NPIPB3Q92617 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
NPIPB3Q92617 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
NPIPB3Q92617 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
NPIPB3Q92617 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NPIPB3Q92617 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NPIPB3Q92617 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
NPIPB3Q92617 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
NPIPB3Q92617 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
NPIPB3Q92617 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC17.4■□□□□ 0.38
NPIPB3Q92617 WWC2-AS2-201ENST00000578387 2183 ntBASIC17.4■□□□□ 0.38
NPIPB3Q92617 MYB-221ENST00000527615 2381 ntTSL 5 BASIC17.4■□□□□ 0.38
NPIPB3Q92617 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NPIPB3Q92617 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
NPIPB3Q92617 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NPIPB3Q92617 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NPIPB3Q92617 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC17.4■□□□□ 0.38
NPIPB3Q92617 TK2-216ENST00000564917 1156 ntTSL 3 BASIC17.4■□□□□ 0.38
NPIPB3Q92617 AC137767.1-201ENST00000602918 1920 ntBASIC17.4■□□□□ 0.38
NPIPB3Q92617 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
NPIPB3Q92617 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC17.4■□□□□ 0.38
NPIPB3Q92617 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
NPIPB3Q92617 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
NPIPB3Q92617 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
NPIPB3Q92617 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
NPIPB3Q92617 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC17.39■□□□□ 0.38
NPIPB3Q92617 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
NPIPB3Q92617 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
NPIPB3Q92617 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NPIPB3Q92617 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC17.39■□□□□ 0.37
NPIPB3Q92617 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NPIPB3Q92617 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
NPIPB3Q92617 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC17.39■□□□□ 0.37
NPIPB3Q92617 AC137630.3-201ENST00000607245 391 ntBASIC17.39■□□□□ 0.37
NPIPB3Q92617 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NPIPB3Q92617 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC17.39■□□□□ 0.37
NPIPB3Q92617 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NPIPB3Q92617 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
NPIPB3Q92617 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
NPIPB3Q92617 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NPIPB3Q92617 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NPIPB3Q92617 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NPIPB3Q92617 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC17.39■□□□□ 0.37
NPIPB3Q92617 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
NPIPB3Q92617 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
NPIPB3Q92617 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NPIPB3Q92617 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
NPIPB3Q92617 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC17.38■□□□□ 0.37
NPIPB3Q92617 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms