Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MBD3L1Q8WWY6 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
MBD3L1Q8WWY6 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MBD3L1Q8WWY6 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MBD3L1Q8WWY6 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MBD3L1Q8WWY6 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MBD3L1Q8WWY6 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MBD3L1Q8WWY6 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
MBD3L1Q8WWY6 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC17.38■□□□□ 0.37
MBD3L1Q8WWY6 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
MBD3L1Q8WWY6 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MBD3L1Q8WWY6 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC17.38■□□□□ 0.37
MBD3L1Q8WWY6 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC17.38■□□□□ 0.37
MBD3L1Q8WWY6 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MBD3L1Q8WWY6 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MBD3L1Q8WWY6 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
MBD3L1Q8WWY6 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MBD3L1Q8WWY6 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
MBD3L1Q8WWY6 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MBD3L1Q8WWY6 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC17.38■□□□□ 0.37
MBD3L1Q8WWY6 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
MBD3L1Q8WWY6 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
MBD3L1Q8WWY6 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
MBD3L1Q8WWY6 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MBD3L1Q8WWY6 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
MBD3L1Q8WWY6 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
MBD3L1Q8WWY6 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MBD3L1Q8WWY6 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
MBD3L1Q8WWY6 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
MBD3L1Q8WWY6 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
MBD3L1Q8WWY6 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
MBD3L1Q8WWY6 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
MBD3L1Q8WWY6 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
MBD3L1Q8WWY6 AL353803.4-201ENST00000565882 1934 ntBASIC17.37■□□□□ 0.37
MBD3L1Q8WWY6 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC17.37■□□□□ 0.37
MBD3L1Q8WWY6 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
MBD3L1Q8WWY6 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
MBD3L1Q8WWY6 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
MBD3L1Q8WWY6 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC17.36■□□□□ 0.37
MBD3L1Q8WWY6 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MBD3L1Q8WWY6 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
MBD3L1Q8WWY6 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC17.36■□□□□ 0.37
MBD3L1Q8WWY6 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MBD3L1Q8WWY6 AC092296.2-201ENST00000589470 999 ntBASIC17.36■□□□□ 0.37
MBD3L1Q8WWY6 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC17.36■□□□□ 0.37
MBD3L1Q8WWY6 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
MBD3L1Q8WWY6 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC17.36■□□□□ 0.37
MBD3L1Q8WWY6 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
MBD3L1Q8WWY6 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
MBD3L1Q8WWY6 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC17.35■□□□□ 0.37
MBD3L1Q8WWY6 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC17.35■□□□□ 0.37
MBD3L1Q8WWY6 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC17.35■□□□□ 0.37
MBD3L1Q8WWY6 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC17.35■□□□□ 0.37
MBD3L1Q8WWY6 STK32C-205ENST00000456004 607 ntTSL 2 BASIC17.35■□□□□ 0.37
MBD3L1Q8WWY6 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC17.35■□□□□ 0.37
MBD3L1Q8WWY6 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
MBD3L1Q8WWY6 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
MBD3L1Q8WWY6 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC17.35■□□□□ 0.37
MBD3L1Q8WWY6 AC244015.2-201ENST00000616358 1861 ntBASIC17.35■□□□□ 0.37
MBD3L1Q8WWY6 LINC01521-201ENST00000504184 1943 ntBASIC17.35■□□□□ 0.37
MBD3L1Q8WWY6 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
MBD3L1Q8WWY6 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
MBD3L1Q8WWY6 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
MBD3L1Q8WWY6 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MBD3L1Q8WWY6 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
MBD3L1Q8WWY6 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
MBD3L1Q8WWY6 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MBD3L1Q8WWY6 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
MBD3L1Q8WWY6 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC17.34■□□□□ 0.37
MBD3L1Q8WWY6 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
MBD3L1Q8WWY6 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MBD3L1Q8WWY6 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
MBD3L1Q8WWY6 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
MBD3L1Q8WWY6 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC17.33■□□□□ 0.37
MBD3L1Q8WWY6 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
MBD3L1Q8WWY6 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC17.33■□□□□ 0.37
MBD3L1Q8WWY6 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.37
MBD3L1Q8WWY6 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
MBD3L1Q8WWY6 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC17.33■□□□□ 0.37
MBD3L1Q8WWY6 AC131274.2-201ENST00000580697 1507 ntBASIC17.33■□□□□ 0.37
MBD3L1Q8WWY6 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
MBD3L1Q8WWY6 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
MBD3L1Q8WWY6 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
MBD3L1Q8WWY6 ECEL1P2-201ENST00000461596 1295 ntBASIC17.33■□□□□ 0.36
MBD3L1Q8WWY6 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
MBD3L1Q8WWY6 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
MBD3L1Q8WWY6 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
MBD3L1Q8WWY6 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
MBD3L1Q8WWY6 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
MBD3L1Q8WWY6 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
MBD3L1Q8WWY6 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MBD3L1Q8WWY6 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC17.32■□□□□ 0.36
MBD3L1Q8WWY6 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
MBD3L1Q8WWY6 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MBD3L1Q8WWY6 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MBD3L1Q8WWY6 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MBD3L1Q8WWY6 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
MBD3L1Q8WWY6 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
MBD3L1Q8WWY6 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MBD3L1Q8WWY6 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms