Protein–RNA interactions for Protein: Q8WVK2

SNRNP27, U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein, humanhuman

Known RBP Predictions only

Length 155 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27Q8WVK2 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
SNRNP27Q8WVK2 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SNRNP27Q8WVK2 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
SNRNP27Q8WVK2 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.46■■□□□ 1.03
SNRNP27Q8WVK2 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
SNRNP27Q8WVK2 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SNRNP27Q8WVK2 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SNRNP27Q8WVK2 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.45■■□□□ 1.02
SNRNP27Q8WVK2 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SNRNP27Q8WVK2 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SNRNP27Q8WVK2 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.45■■□□□ 1.02
SNRNP27Q8WVK2 BX842568.3-201ENST00000418104 571 ntBASIC21.45■■□□□ 1.02
SNRNP27Q8WVK2 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.45■■□□□ 1.02
SNRNP27Q8WVK2 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SNRNP27Q8WVK2 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.45■■□□□ 1.02
SNRNP27Q8WVK2 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.45■■□□□ 1.02
SNRNP27Q8WVK2 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SNRNP27Q8WVK2 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SNRNP27Q8WVK2 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SNRNP27Q8WVK2 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SNRNP27Q8WVK2 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SNRNP27Q8WVK2 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
SNRNP27Q8WVK2 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SNRNP27Q8WVK2 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
SNRNP27Q8WVK2 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC21.44■■□□□ 1.02
SNRNP27Q8WVK2 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SNRNP27Q8WVK2 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SNRNP27Q8WVK2 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.44■■□□□ 1.02
SNRNP27Q8WVK2 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.44■■□□□ 1.02
SNRNP27Q8WVK2 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
SNRNP27Q8WVK2 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SNRNP27Q8WVK2 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SNRNP27Q8WVK2 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.44■■□□□ 1.02
SNRNP27Q8WVK2 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SNRNP27Q8WVK2 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SNRNP27Q8WVK2 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
SNRNP27Q8WVK2 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.43■■□□□ 1.02
SNRNP27Q8WVK2 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
SNRNP27Q8WVK2 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SNRNP27Q8WVK2 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SNRNP27Q8WVK2 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.43■■□□□ 1.02
SNRNP27Q8WVK2 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SNRNP27Q8WVK2 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SNRNP27Q8WVK2 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.43■■□□□ 1.02
SNRNP27Q8WVK2 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.43■■□□□ 1.02
SNRNP27Q8WVK2 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.43■■□□□ 1.02
SNRNP27Q8WVK2 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SNRNP27Q8WVK2 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.43■■□□□ 1.02
SNRNP27Q8WVK2 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SNRNP27Q8WVK2 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.43■■□□□ 1.02
SNRNP27Q8WVK2 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
SNRNP27Q8WVK2 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SNRNP27Q8WVK2 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SNRNP27Q8WVK2 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SNRNP27Q8WVK2 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SNRNP27Q8WVK2 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
SNRNP27Q8WVK2 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SNRNP27Q8WVK2 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SNRNP27Q8WVK2 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
SNRNP27Q8WVK2 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
SNRNP27Q8WVK2 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.42■■□□□ 1.02
SNRNP27Q8WVK2 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.42■■□□□ 1.02
SNRNP27Q8WVK2 AC241377.3-202ENST00000626088 1088 ntBASIC21.42■■□□□ 1.02
SNRNP27Q8WVK2 AC241585.3-202ENST00000628937 1088 ntBASIC21.42■■□□□ 1.02
SNRNP27Q8WVK2 AC245100.8-202ENST00000629247 1058 ntBASIC21.42■■□□□ 1.02
SNRNP27Q8WVK2 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.42■■□□□ 1.02
SNRNP27Q8WVK2 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.42■■□□□ 1.02
SNRNP27Q8WVK2 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
SNRNP27Q8WVK2 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SNRNP27Q8WVK2 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
SNRNP27Q8WVK2 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SNRNP27Q8WVK2 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SNRNP27Q8WVK2 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SNRNP27Q8WVK2 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.41■■□□□ 1.02
SNRNP27Q8WVK2 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SNRNP27Q8WVK2 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SNRNP27Q8WVK2 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SNRNP27Q8WVK2 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SNRNP27Q8WVK2 DUSP8P5-201ENST00000422884 1815 ntBASIC21.41■■□□□ 1.02
SNRNP27Q8WVK2 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SNRNP27Q8WVK2 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SNRNP27Q8WVK2 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
SNRNP27Q8WVK2 C1orf229-201ENST00000623686 2258 ntBASIC21.4■■□□□ 1.02
SNRNP27Q8WVK2 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.4■■□□□ 1.02
SNRNP27Q8WVK2 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.4■■□□□ 1.02
SNRNP27Q8WVK2 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.4■■□□□ 1.02
SNRNP27Q8WVK2 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SNRNP27Q8WVK2 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SNRNP27Q8WVK2 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
SNRNP27Q8WVK2 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
SNRNP27Q8WVK2 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SNRNP27Q8WVK2 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SNRNP27Q8WVK2 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
SNRNP27Q8WVK2 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.39■■□□□ 1.02
SNRNP27Q8WVK2 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
SNRNP27Q8WVK2 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.02
SNRNP27Q8WVK2 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
SNRNP27Q8WVK2 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.39■■□□□ 1.02
SNRNP27Q8WVK2 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
SNRNP27Q8WVK2 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms