Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SPTSSBQ8NFR3 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
SPTSSBQ8NFR3 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
SPTSSBQ8NFR3 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC12.21□□□□□ -0.45
SPTSSBQ8NFR3 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC12.21□□□□□ -0.45
SPTSSBQ8NFR3 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SPTSSBQ8NFR3 WWC2-AS2-201ENST00000578387 2183 ntBASIC12.21□□□□□ -0.45
SPTSSBQ8NFR3 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.45
SPTSSBQ8NFR3 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SPTSSBQ8NFR3 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
SPTSSBQ8NFR3 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SPTSSBQ8NFR3 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC12.21□□□□□ -0.45
SPTSSBQ8NFR3 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
SPTSSBQ8NFR3 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
SPTSSBQ8NFR3 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC12.21□□□□□ -0.46
SPTSSBQ8NFR3 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC12.21□□□□□ -0.46
SPTSSBQ8NFR3 AC138932.3-201ENST00000567634 1902 ntBASIC12.21□□□□□ -0.46
SPTSSBQ8NFR3 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
SPTSSBQ8NFR3 AC097639.1-201ENST00000565519 1891 ntBASIC12.21□□□□□ -0.46
SPTSSBQ8NFR3 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
SPTSSBQ8NFR3 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
SPTSSBQ8NFR3 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC12.21□□□□□ -0.46
SPTSSBQ8NFR3 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SPTSSBQ8NFR3 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC12.2□□□□□ -0.46
SPTSSBQ8NFR3 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
SPTSSBQ8NFR3 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SPTSSBQ8NFR3 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC12.2□□□□□ -0.46
SPTSSBQ8NFR3 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SPTSSBQ8NFR3 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
SPTSSBQ8NFR3 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
SPTSSBQ8NFR3 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SPTSSBQ8NFR3 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
SPTSSBQ8NFR3 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SPTSSBQ8NFR3 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
SPTSSBQ8NFR3 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SPTSSBQ8NFR3 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
SPTSSBQ8NFR3 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
SPTSSBQ8NFR3 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
SPTSSBQ8NFR3 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SPTSSBQ8NFR3 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
SPTSSBQ8NFR3 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SPTSSBQ8NFR3 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SPTSSBQ8NFR3 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
SPTSSBQ8NFR3 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SPTSSBQ8NFR3 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
SPTSSBQ8NFR3 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
SPTSSBQ8NFR3 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SPTSSBQ8NFR3 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SPTSSBQ8NFR3 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
SPTSSBQ8NFR3 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
SPTSSBQ8NFR3 AC026471.1-201ENST00000564629 3026 ntBASIC12.19□□□□□ -0.46
SPTSSBQ8NFR3 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
SPTSSBQ8NFR3 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SPTSSBQ8NFR3 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SPTSSBQ8NFR3 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SPTSSBQ8NFR3 AP003733.4-201ENST00000623785 1697 ntBASIC12.19□□□□□ -0.46
SPTSSBQ8NFR3 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
SPTSSBQ8NFR3 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SPTSSBQ8NFR3 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
SPTSSBQ8NFR3 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
SPTSSBQ8NFR3 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC12.19□□□□□ -0.46
SPTSSBQ8NFR3 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
SPTSSBQ8NFR3 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SPTSSBQ8NFR3 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SPTSSBQ8NFR3 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
SPTSSBQ8NFR3 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC12.18□□□□□ -0.46
SPTSSBQ8NFR3 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
SPTSSBQ8NFR3 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SPTSSBQ8NFR3 EED-207ENST00000528180 1745 ntTSL 5 BASIC12.18□□□□□ -0.46
SPTSSBQ8NFR3 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SPTSSBQ8NFR3 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC12.18□□□□□ -0.46
SPTSSBQ8NFR3 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
SPTSSBQ8NFR3 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
SPTSSBQ8NFR3 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SPTSSBQ8NFR3 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
SPTSSBQ8NFR3 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SPTSSBQ8NFR3 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
SPTSSBQ8NFR3 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
SPTSSBQ8NFR3 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
SPTSSBQ8NFR3 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SPTSSBQ8NFR3 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
SPTSSBQ8NFR3 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
SPTSSBQ8NFR3 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SPTSSBQ8NFR3 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
SPTSSBQ8NFR3 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
SPTSSBQ8NFR3 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SPTSSBQ8NFR3 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC12.17□□□□□ -0.46
SPTSSBQ8NFR3 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SPTSSBQ8NFR3 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SPTSSBQ8NFR3 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
SPTSSBQ8NFR3 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SPTSSBQ8NFR3 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SPTSSBQ8NFR3 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SPTSSBQ8NFR3 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SPTSSBQ8NFR3 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SPTSSBQ8NFR3 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC12.17□□□□□ -0.46
SPTSSBQ8NFR3 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
SPTSSBQ8NFR3 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SPTSSBQ8NFR3 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC12.17□□□□□ -0.46
SPTSSBQ8NFR3 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms