Protein–RNA interactions for Protein: Q8NEE8

TTC16, Tetratricopeptide repeat protein 16, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC16Q8NEE8 NME4-211ENST00000620944 1193 ntTSL 2 BASIC23.16■■□□□ 1.3
TTC16Q8NEE8 LINC01529-204ENST00000636474 1715 ntBASIC23.16■■□□□ 1.3
TTC16Q8NEE8 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TTC16Q8NEE8 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TTC16Q8NEE8 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TTC16Q8NEE8 AC144652.1-201ENST00000609974 1624 ntBASIC23.15■■□□□ 1.3
TTC16Q8NEE8 LINC00543-201ENST00000567234 1845 ntBASIC23.15■■□□□ 1.3
TTC16Q8NEE8 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
TTC16Q8NEE8 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
TTC16Q8NEE8 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TTC16Q8NEE8 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC23.15■■□□□ 1.3
TTC16Q8NEE8 PARL-206ENST00000435888 1098 ntTSL 5 BASIC23.15■■□□□ 1.3
TTC16Q8NEE8 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TTC16Q8NEE8 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
TTC16Q8NEE8 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
TTC16Q8NEE8 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
TTC16Q8NEE8 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TTC16Q8NEE8 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC23.15■■□□□ 1.3
TTC16Q8NEE8 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC23.14■■□□□ 1.3
TTC16Q8NEE8 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC23.14■■□□□ 1.3
TTC16Q8NEE8 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC23.14■■□□□ 1.3
TTC16Q8NEE8 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC23.14■■□□□ 1.3
TTC16Q8NEE8 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
TTC16Q8NEE8 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
TTC16Q8NEE8 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC23.14■■□□□ 1.29
TTC16Q8NEE8 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC23.14■■□□□ 1.29
TTC16Q8NEE8 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
TTC16Q8NEE8 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC23.14■■□□□ 1.29
TTC16Q8NEE8 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TTC16Q8NEE8 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TTC16Q8NEE8 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC23.13■■□□□ 1.29
TTC16Q8NEE8 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC23.13■■□□□ 1.29
TTC16Q8NEE8 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
TTC16Q8NEE8 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
TTC16Q8NEE8 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC23.13■■□□□ 1.29
TTC16Q8NEE8 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC23.13■■□□□ 1.29
TTC16Q8NEE8 MIR6084-201ENST00000622012 110 ntBASIC23.13■■□□□ 1.29
TTC16Q8NEE8 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TTC16Q8NEE8 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC23.13■■□□□ 1.29
TTC16Q8NEE8 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
TTC16Q8NEE8 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC23.12■■□□□ 1.29
TTC16Q8NEE8 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
TTC16Q8NEE8 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC23.12■■□□□ 1.29
TTC16Q8NEE8 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
TTC16Q8NEE8 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
TTC16Q8NEE8 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TTC16Q8NEE8 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
TTC16Q8NEE8 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC23.12■■□□□ 1.29
TTC16Q8NEE8 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
TTC16Q8NEE8 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TTC16Q8NEE8 PKM-204ENST00000449901 2526 ntTSL 2 BASIC23.11■■□□□ 1.29
TTC16Q8NEE8 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC23.11■■□□□ 1.29
TTC16Q8NEE8 AL162430.1-201ENST00000480705 870 ntBASIC23.11■■□□□ 1.29
TTC16Q8NEE8 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TTC16Q8NEE8 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TTC16Q8NEE8 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TTC16Q8NEE8 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
TTC16Q8NEE8 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC23.11■■□□□ 1.29
TTC16Q8NEE8 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
TTC16Q8NEE8 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
TTC16Q8NEE8 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
TTC16Q8NEE8 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
TTC16Q8NEE8 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
TTC16Q8NEE8 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
TTC16Q8NEE8 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
TTC16Q8NEE8 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
TTC16Q8NEE8 FP325331.1-202ENST00000623531 1380 ntBASIC23.1■■□□□ 1.29
TTC16Q8NEE8 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
TTC16Q8NEE8 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
TTC16Q8NEE8 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
TTC16Q8NEE8 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
TTC16Q8NEE8 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
TTC16Q8NEE8 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
TTC16Q8NEE8 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TTC16Q8NEE8 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TTC16Q8NEE8 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
TTC16Q8NEE8 AICDA-202ENST00000537228 667 ntTSL 5 BASIC23.09■■□□□ 1.29
TTC16Q8NEE8 DUX4L4-201ENST00000566884 1269 ntBASIC23.09■■□□□ 1.29
TTC16Q8NEE8 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC23.09■■□□□ 1.29
TTC16Q8NEE8 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC23.09■■□□□ 1.29
TTC16Q8NEE8 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TTC16Q8NEE8 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TTC16Q8NEE8 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC23.09■■□□□ 1.29
TTC16Q8NEE8 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TTC16Q8NEE8 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC23.09■■□□□ 1.29
TTC16Q8NEE8 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
TTC16Q8NEE8 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
TTC16Q8NEE8 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
TTC16Q8NEE8 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
TTC16Q8NEE8 AC079630.1-202ENST00000618127 1840 ntBASIC23.08■■□□□ 1.29
TTC16Q8NEE8 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
TTC16Q8NEE8 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
TTC16Q8NEE8 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
TTC16Q8NEE8 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
TTC16Q8NEE8 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
TTC16Q8NEE8 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC23.08■■□□□ 1.29
TTC16Q8NEE8 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
TTC16Q8NEE8 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
TTC16Q8NEE8 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
TTC16Q8NEE8 AL499627.2-201ENST00000606283 725 ntBASIC23.08■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms