Protein–RNA interactions for Protein: Q8NEB9

PIK3C3, Phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3Q8NEB9 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.68■□□□□ 0.9
PIK3C3Q8NEB9 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PIK3C3Q8NEB9 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PIK3C3Q8NEB9 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.68■□□□□ 0.9
PIK3C3Q8NEB9 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.68■□□□□ 0.9
PIK3C3Q8NEB9 AF131216.4-201ENST00000638924 1588 ntBASIC20.68■□□□□ 0.9
PIK3C3Q8NEB9 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PIK3C3Q8NEB9 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PIK3C3Q8NEB9 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PIK3C3Q8NEB9 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
PIK3C3Q8NEB9 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PIK3C3Q8NEB9 KRT18P24-201ENST00000344739 1156 ntBASIC20.67■□□□□ 0.9
PIK3C3Q8NEB9 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PIK3C3Q8NEB9 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.67■□□□□ 0.9
PIK3C3Q8NEB9 THA1P-201ENST00000590384 1145 ntBASIC20.67■□□□□ 0.9
PIK3C3Q8NEB9 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.67■□□□□ 0.9
PIK3C3Q8NEB9 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PIK3C3Q8NEB9 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
PIK3C3Q8NEB9 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
PIK3C3Q8NEB9 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PIK3C3Q8NEB9 AC079630.1-202ENST00000618127 1840 ntBASIC20.67■□□□□ 0.9
PIK3C3Q8NEB9 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PIK3C3Q8NEB9 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
PIK3C3Q8NEB9 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PIK3C3Q8NEB9 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PIK3C3Q8NEB9 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
PIK3C3Q8NEB9 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PIK3C3Q8NEB9 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PIK3C3Q8NEB9 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PIK3C3Q8NEB9 AC103834.1-201ENST00000520383 144 ntBASIC20.66■□□□□ 0.9
PIK3C3Q8NEB9 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.66■□□□□ 0.9
PIK3C3Q8NEB9 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PIK3C3Q8NEB9 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.66■□□□□ 0.9
PIK3C3Q8NEB9 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.66■□□□□ 0.9
PIK3C3Q8NEB9 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.66■□□□□ 0.9
PIK3C3Q8NEB9 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.66■□□□□ 0.9
PIK3C3Q8NEB9 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PIK3C3Q8NEB9 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PIK3C3Q8NEB9 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PIK3C3Q8NEB9 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PIK3C3Q8NEB9 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PIK3C3Q8NEB9 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.65■□□□□ 0.9
PIK3C3Q8NEB9 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.65■□□□□ 0.9
PIK3C3Q8NEB9 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PIK3C3Q8NEB9 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PIK3C3Q8NEB9 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PIK3C3Q8NEB9 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PIK3C3Q8NEB9 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.65■□□□□ 0.9
PIK3C3Q8NEB9 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PIK3C3Q8NEB9 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.65■□□□□ 0.9
PIK3C3Q8NEB9 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PIK3C3Q8NEB9 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PIK3C3Q8NEB9 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.65■□□□□ 0.9
PIK3C3Q8NEB9 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PIK3C3Q8NEB9 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PIK3C3Q8NEB9 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PIK3C3Q8NEB9 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
PIK3C3Q8NEB9 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
PIK3C3Q8NEB9 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.64■□□□□ 0.89
PIK3C3Q8NEB9 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PIK3C3Q8NEB9 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PIK3C3Q8NEB9 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
PIK3C3Q8NEB9 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
PIK3C3Q8NEB9 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PIK3C3Q8NEB9 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
PIK3C3Q8NEB9 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PIK3C3Q8NEB9 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.63■□□□□ 0.89
PIK3C3Q8NEB9 C11orf96-202ENST00000528572 1834 ntBASIC20.63■□□□□ 0.89
PIK3C3Q8NEB9 AC092053.2-201ENST00000640557 1818 ntBASIC20.63■□□□□ 0.89
PIK3C3Q8NEB9 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PIK3C3Q8NEB9 MIR4281-201ENST00000580852 62 ntBASIC20.63■□□□□ 0.89
PIK3C3Q8NEB9 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
PIK3C3Q8NEB9 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.63■□□□□ 0.89
PIK3C3Q8NEB9 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
PIK3C3Q8NEB9 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
PIK3C3Q8NEB9 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.63■□□□□ 0.89
PIK3C3Q8NEB9 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.63■□□□□ 0.89
PIK3C3Q8NEB9 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PIK3C3Q8NEB9 AC139530.1-201ENST00000575312 1977 ntBASIC20.63■□□□□ 0.89
PIK3C3Q8NEB9 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.62■□□□□ 0.89
PIK3C3Q8NEB9 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
PIK3C3Q8NEB9 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PIK3C3Q8NEB9 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
PIK3C3Q8NEB9 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
PIK3C3Q8NEB9 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PIK3C3Q8NEB9 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PIK3C3Q8NEB9 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.62■□□□□ 0.89
PIK3C3Q8NEB9 AC004448.1-201ENST00000458332 883 ntBASIC20.62■□□□□ 0.89
PIK3C3Q8NEB9 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PIK3C3Q8NEB9 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.62■□□□□ 0.89
PIK3C3Q8NEB9 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.62■□□□□ 0.89
PIK3C3Q8NEB9 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PIK3C3Q8NEB9 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PIK3C3Q8NEB9 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PIK3C3Q8NEB9 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.62■□□□□ 0.89
PIK3C3Q8NEB9 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.61■□□□□ 0.89
PIK3C3Q8NEB9 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
PIK3C3Q8NEB9 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PIK3C3Q8NEB9 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PIK3C3Q8NEB9 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms