Protein–RNA interactions for Protein: Q8N6N2

TTC9B, Tetratricopeptide repeat protein 9B, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9BQ8N6N2 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC23.38■■□□□ 1.33
TTC9BQ8N6N2 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
TTC9BQ8N6N2 MIR572-201ENST00000384983 95 ntBASIC23.38■■□□□ 1.33
TTC9BQ8N6N2 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC23.38■■□□□ 1.33
TTC9BQ8N6N2 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
TTC9BQ8N6N2 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
TTC9BQ8N6N2 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC23.38■■□□□ 1.33
TTC9BQ8N6N2 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TTC9BQ8N6N2 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
TTC9BQ8N6N2 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
TTC9BQ8N6N2 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
TTC9BQ8N6N2 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
TTC9BQ8N6N2 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC23.37■■□□□ 1.33
TTC9BQ8N6N2 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TTC9BQ8N6N2 AK1-201ENST00000223836 736 ntTSL 3 BASIC23.37■■□□□ 1.33
TTC9BQ8N6N2 HACD1-201ENST00000326961 773 ntTSL 2 BASIC23.37■■□□□ 1.33
TTC9BQ8N6N2 NME4-202ENST00000382940 766 ntTSL 3 BASIC23.37■■□□□ 1.33
TTC9BQ8N6N2 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TTC9BQ8N6N2 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC23.37■■□□□ 1.33
TTC9BQ8N6N2 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
TTC9BQ8N6N2 NME4-211ENST00000620944 1193 ntTSL 2 BASIC23.37■■□□□ 1.33
TTC9BQ8N6N2 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
TTC9BQ8N6N2 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TTC9BQ8N6N2 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
TTC9BQ8N6N2 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC23.36■■□□□ 1.33
TTC9BQ8N6N2 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
TTC9BQ8N6N2 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TTC9BQ8N6N2 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
TTC9BQ8N6N2 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
TTC9BQ8N6N2 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
TTC9BQ8N6N2 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TTC9BQ8N6N2 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TTC9BQ8N6N2 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC23.35■■□□□ 1.33
TTC9BQ8N6N2 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC23.35■■□□□ 1.33
TTC9BQ8N6N2 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TTC9BQ8N6N2 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC23.35■■□□□ 1.33
TTC9BQ8N6N2 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TTC9BQ8N6N2 AC012414.1-201ENST00000556676 535 ntBASIC23.35■■□□□ 1.33
TTC9BQ8N6N2 AC104564.3-201ENST00000582367 638 ntBASIC23.35■■□□□ 1.33
TTC9BQ8N6N2 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC23.35■■□□□ 1.33
TTC9BQ8N6N2 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC23.35■■□□□ 1.33
TTC9BQ8N6N2 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TTC9BQ8N6N2 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TTC9BQ8N6N2 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TTC9BQ8N6N2 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
TTC9BQ8N6N2 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC23.34■■□□□ 1.33
TTC9BQ8N6N2 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
TTC9BQ8N6N2 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
TTC9BQ8N6N2 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TTC9BQ8N6N2 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TTC9BQ8N6N2 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
TTC9BQ8N6N2 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TTC9BQ8N6N2 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
TTC9BQ8N6N2 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TTC9BQ8N6N2 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC23.33■■□□□ 1.33
TTC9BQ8N6N2 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
TTC9BQ8N6N2 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
TTC9BQ8N6N2 YBX1P1-201ENST00000445822 960 ntBASIC23.33■■□□□ 1.33
TTC9BQ8N6N2 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC23.33■■□□□ 1.33
TTC9BQ8N6N2 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC23.33■■□□□ 1.33
TTC9BQ8N6N2 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC23.33■■□□□ 1.32
TTC9BQ8N6N2 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
TTC9BQ8N6N2 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TTC9BQ8N6N2 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC23.32■■□□□ 1.32
TTC9BQ8N6N2 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC23.32■■□□□ 1.32
TTC9BQ8N6N2 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC23.32■■□□□ 1.32
TTC9BQ8N6N2 AP005435.1-201ENST00000529293 1178 ntBASIC23.32■■□□□ 1.32
TTC9BQ8N6N2 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC23.32■■□□□ 1.32
TTC9BQ8N6N2 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TTC9BQ8N6N2 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TTC9BQ8N6N2 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TTC9BQ8N6N2 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
TTC9BQ8N6N2 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TTC9BQ8N6N2 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC23.31■■□□□ 1.32
TTC9BQ8N6N2 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC23.31■■□□□ 1.32
TTC9BQ8N6N2 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC23.31■■□□□ 1.32
TTC9BQ8N6N2 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TTC9BQ8N6N2 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TTC9BQ8N6N2 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC23.31■■□□□ 1.32
TTC9BQ8N6N2 AL358852.1-201ENST00000623174 1268 ntBASIC23.31■■□□□ 1.32
TTC9BQ8N6N2 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC23.31■■□□□ 1.32
TTC9BQ8N6N2 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
TTC9BQ8N6N2 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TTC9BQ8N6N2 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC23.3■■□□□ 1.32
TTC9BQ8N6N2 AC027612.3-201ENST00000413684 1047 ntBASIC23.3■■□□□ 1.32
TTC9BQ8N6N2 PARL-206ENST00000435888 1098 ntTSL 5 BASIC23.3■■□□□ 1.32
TTC9BQ8N6N2 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC23.3■■□□□ 1.32
TTC9BQ8N6N2 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
TTC9BQ8N6N2 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC23.3■■□□□ 1.32
TTC9BQ8N6N2 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC23.3■■□□□ 1.32
TTC9BQ8N6N2 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
TTC9BQ8N6N2 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TTC9BQ8N6N2 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TTC9BQ8N6N2 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC23.29■■□□□ 1.32
TTC9BQ8N6N2 RAB43-208ENST00000615093 783 ntTSL 5 BASIC23.29■■□□□ 1.32
TTC9BQ8N6N2 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC23.29■■□□□ 1.32
TTC9BQ8N6N2 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
TTC9BQ8N6N2 ANOS2P-203ENST00000472227 1816 ntBASIC23.29■■□□□ 1.32
TTC9BQ8N6N2 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TTC9BQ8N6N2 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms