Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
TRAM1L1Q8N609 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TRAM1L1Q8N609 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
TRAM1L1Q8N609 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
TRAM1L1Q8N609 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
TRAM1L1Q8N609 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
TRAM1L1Q8N609 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.96■■□□□ 1.11
TRAM1L1Q8N609 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TRAM1L1Q8N609 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TRAM1L1Q8N609 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
TRAM1L1Q8N609 OR2I1P-207ENST00000453522 948 ntBASIC21.96■■□□□ 1.11
TRAM1L1Q8N609 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
TRAM1L1Q8N609 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.96■■□□□ 1.11
TRAM1L1Q8N609 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TRAM1L1Q8N609 AC005837.3-201ENST00000612163 286 ntBASIC21.96■■□□□ 1.11
TRAM1L1Q8N609 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
TRAM1L1Q8N609 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
TRAM1L1Q8N609 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.95■■□□□ 1.1
TRAM1L1Q8N609 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.95■■□□□ 1.1
TRAM1L1Q8N609 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.95■■□□□ 1.1
TRAM1L1Q8N609 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
TRAM1L1Q8N609 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
TRAM1L1Q8N609 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
TRAM1L1Q8N609 BX842568.3-201ENST00000418104 571 ntBASIC21.94■■□□□ 1.1
TRAM1L1Q8N609 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
TRAM1L1Q8N609 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
TRAM1L1Q8N609 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.94■■□□□ 1.1
TRAM1L1Q8N609 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
TRAM1L1Q8N609 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
TRAM1L1Q8N609 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TRAM1L1Q8N609 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TRAM1L1Q8N609 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
TRAM1L1Q8N609 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TRAM1L1Q8N609 AP001330.3-201ENST00000520123 633 ntBASIC21.93■■□□□ 1.1
TRAM1L1Q8N609 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TRAM1L1Q8N609 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.92■■□□□ 1.1
TRAM1L1Q8N609 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
TRAM1L1Q8N609 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.92■■□□□ 1.1
TRAM1L1Q8N609 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TRAM1L1Q8N609 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TRAM1L1Q8N609 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.92■■□□□ 1.1
TRAM1L1Q8N609 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
TRAM1L1Q8N609 SUDS3P1-201ENST00000505831 966 ntBASIC21.92■■□□□ 1.1
TRAM1L1Q8N609 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TRAM1L1Q8N609 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
TRAM1L1Q8N609 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TRAM1L1Q8N609 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TRAM1L1Q8N609 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
TRAM1L1Q8N609 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.91■■□□□ 1.1
TRAM1L1Q8N609 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
TRAM1L1Q8N609 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.91■■□□□ 1.1
TRAM1L1Q8N609 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.91■■□□□ 1.1
TRAM1L1Q8N609 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TRAM1L1Q8N609 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
TRAM1L1Q8N609 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
TRAM1L1Q8N609 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
TRAM1L1Q8N609 SLC47A1P1-202ENST00000449666 945 ntBASIC21.91■■□□□ 1.1
TRAM1L1Q8N609 AC027682.1-201ENST00000562846 899 ntBASIC21.91■■□□□ 1.1
TRAM1L1Q8N609 AF213884.3-201ENST00000563833 479 ntBASIC21.91■■□□□ 1.1
TRAM1L1Q8N609 AC233992.3-201ENST00000607491 485 ntBASIC21.91■■□□□ 1.1
TRAM1L1Q8N609 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
TRAM1L1Q8N609 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.9■■□□□ 1.1
TRAM1L1Q8N609 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
TRAM1L1Q8N609 MIR939-201ENST00000401314 82 ntBASIC21.9■■□□□ 1.1
TRAM1L1Q8N609 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TRAM1L1Q8N609 AC142381.2-201ENST00000566120 298 ntBASIC21.9■■□□□ 1.1
TRAM1L1Q8N609 AC010525.1-201ENST00000585559 441 ntBASIC21.9■■□□□ 1.1
TRAM1L1Q8N609 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
TRAM1L1Q8N609 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
TRAM1L1Q8N609 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.9■■□□□ 1.1
TRAM1L1Q8N609 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
TRAM1L1Q8N609 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TRAM1L1Q8N609 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
TRAM1L1Q8N609 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
TRAM1L1Q8N609 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.89■■□□□ 1.09
TRAM1L1Q8N609 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
TRAM1L1Q8N609 AC008764.7-201ENST00000593779 1081 ntBASIC21.89■■□□□ 1.09
TRAM1L1Q8N609 AL136967.2-201ENST00000623968 743 ntBASIC21.89■■□□□ 1.09
TRAM1L1Q8N609 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.89■■□□□ 1.09
TRAM1L1Q8N609 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TRAM1L1Q8N609 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
TRAM1L1Q8N609 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
TRAM1L1Q8N609 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
TRAM1L1Q8N609 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.88■■□□□ 1.09
TRAM1L1Q8N609 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
TRAM1L1Q8N609 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
TRAM1L1Q8N609 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC21.88■■□□□ 1.09
TRAM1L1Q8N609 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.88■■□□□ 1.09
TRAM1L1Q8N609 AC091305.1-201ENST00000479476 895 ntBASIC21.88■■□□□ 1.09
TRAM1L1Q8N609 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.88■■□□□ 1.09
TRAM1L1Q8N609 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.88■■□□□ 1.09
TRAM1L1Q8N609 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
TRAM1L1Q8N609 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.88■■□□□ 1.09
TRAM1L1Q8N609 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.88■■□□□ 1.09
TRAM1L1Q8N609 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TRAM1L1Q8N609 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
TRAM1L1Q8N609 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TRAM1L1Q8N609 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.88■■□□□ 1.09
TRAM1L1Q8N609 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
TRAM1L1Q8N609 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms