Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
C11orf42Q8N5U0 AC079834.2-201ENST00000609776 1949 ntBASIC18.35■□□□□ 0.53
C11orf42Q8N5U0 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.35■□□□□ 0.53
C11orf42Q8N5U0 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
C11orf42Q8N5U0 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
C11orf42Q8N5U0 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC18.34■□□□□ 0.53
C11orf42Q8N5U0 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
C11orf42Q8N5U0 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
C11orf42Q8N5U0 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
C11orf42Q8N5U0 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
C11orf42Q8N5U0 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
C11orf42Q8N5U0 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
C11orf42Q8N5U0 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC18.34■□□□□ 0.53
C11orf42Q8N5U0 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC18.34■□□□□ 0.53
C11orf42Q8N5U0 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
C11orf42Q8N5U0 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
C11orf42Q8N5U0 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
C11orf42Q8N5U0 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
C11orf42Q8N5U0 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
C11orf42Q8N5U0 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
C11orf42Q8N5U0 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
C11orf42Q8N5U0 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
C11orf42Q8N5U0 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
C11orf42Q8N5U0 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
C11orf42Q8N5U0 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
C11orf42Q8N5U0 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
C11orf42Q8N5U0 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
C11orf42Q8N5U0 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.53
C11orf42Q8N5U0 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
C11orf42Q8N5U0 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
C11orf42Q8N5U0 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
C11orf42Q8N5U0 AC006455.2-201ENST00000429931 906 ntBASIC18.33■□□□□ 0.52
C11orf42Q8N5U0 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC18.33■□□□□ 0.52
C11orf42Q8N5U0 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
C11orf42Q8N5U0 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
C11orf42Q8N5U0 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
C11orf42Q8N5U0 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
C11orf42Q8N5U0 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
C11orf42Q8N5U0 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
C11orf42Q8N5U0 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
C11orf42Q8N5U0 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
C11orf42Q8N5U0 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC18.32■□□□□ 0.52
C11orf42Q8N5U0 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
C11orf42Q8N5U0 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
C11orf42Q8N5U0 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
C11orf42Q8N5U0 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.32■□□□□ 0.52
C11orf42Q8N5U0 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC18.32■□□□□ 0.52
C11orf42Q8N5U0 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC18.32■□□□□ 0.52
C11orf42Q8N5U0 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
C11orf42Q8N5U0 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
C11orf42Q8N5U0 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
C11orf42Q8N5U0 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC18.32■□□□□ 0.52
C11orf42Q8N5U0 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
C11orf42Q8N5U0 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
C11orf42Q8N5U0 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.31■□□□□ 0.52
C11orf42Q8N5U0 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
C11orf42Q8N5U0 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC18.31■□□□□ 0.52
C11orf42Q8N5U0 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC18.31■□□□□ 0.52
C11orf42Q8N5U0 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.31■□□□□ 0.52
C11orf42Q8N5U0 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.31■□□□□ 0.52
C11orf42Q8N5U0 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC18.31■□□□□ 0.52
C11orf42Q8N5U0 AC092171.4-201ENST00000609130 632 ntBASIC18.31■□□□□ 0.52
C11orf42Q8N5U0 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC18.31■□□□□ 0.52
C11orf42Q8N5U0 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.31■□□□□ 0.52
C11orf42Q8N5U0 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
C11orf42Q8N5U0 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
C11orf42Q8N5U0 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC18.31■□□□□ 0.52
C11orf42Q8N5U0 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
C11orf42Q8N5U0 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
C11orf42Q8N5U0 CASK-201ENST00000378154 2494 ntTSL 5 BASIC18.3■□□□□ 0.52
C11orf42Q8N5U0 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
C11orf42Q8N5U0 DUSP8P3-201ENST00000399571 1760 ntBASIC18.3■□□□□ 0.52
C11orf42Q8N5U0 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
C11orf42Q8N5U0 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
C11orf42Q8N5U0 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
C11orf42Q8N5U0 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
C11orf42Q8N5U0 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
C11orf42Q8N5U0 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC18.3■□□□□ 0.52
C11orf42Q8N5U0 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC18.3■□□□□ 0.52
C11orf42Q8N5U0 AC009086.3-201ENST00000623486 1008 ntBASIC18.3■□□□□ 0.52
C11orf42Q8N5U0 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
C11orf42Q8N5U0 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
C11orf42Q8N5U0 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
C11orf42Q8N5U0 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
C11orf42Q8N5U0 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.3■□□□□ 0.52
C11orf42Q8N5U0 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
C11orf42Q8N5U0 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
C11orf42Q8N5U0 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
C11orf42Q8N5U0 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
C11orf42Q8N5U0 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
C11orf42Q8N5U0 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC18.29■□□□□ 0.52
C11orf42Q8N5U0 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
C11orf42Q8N5U0 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC18.29■□□□□ 0.52
C11orf42Q8N5U0 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC18.29■□□□□ 0.52
C11orf42Q8N5U0 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
C11orf42Q8N5U0 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
C11orf42Q8N5U0 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
C11orf42Q8N5U0 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC18.29■□□□□ 0.52
C11orf42Q8N5U0 DUX4L19-201ENST00000557448 1267 ntBASIC18.29■□□□□ 0.52
C11orf42Q8N5U0 AL499627.2-201ENST00000606283 725 ntBASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms