Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SCML4Q8N228 AC004687.1-201ENST00000579003 1625 ntBASIC23.15■■□□□ 1.3
SCML4Q8N228 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SCML4Q8N228 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
SCML4Q8N228 SLC47A1P1-202ENST00000449666 945 ntBASIC23.15■■□□□ 1.3
SCML4Q8N228 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SCML4Q8N228 AC091305.1-201ENST00000479476 895 ntBASIC23.15■■□□□ 1.3
SCML4Q8N228 AF213884.3-201ENST00000563833 479 ntBASIC23.15■■□□□ 1.3
SCML4Q8N228 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SCML4Q8N228 MPST-208ENST00000628507 698 ntTSL 5 BASIC23.15■■□□□ 1.3
SCML4Q8N228 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC23.15■■□□□ 1.3
SCML4Q8N228 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SCML4Q8N228 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC23.15■■□□□ 1.3
SCML4Q8N228 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC23.14■■□□□ 1.29
SCML4Q8N228 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC23.14■■□□□ 1.29
SCML4Q8N228 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
SCML4Q8N228 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC23.14■■□□□ 1.29
SCML4Q8N228 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC23.14■■□□□ 1.29
SCML4Q8N228 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SCML4Q8N228 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC23.14■■□□□ 1.29
SCML4Q8N228 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
SCML4Q8N228 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC23.14■■□□□ 1.29
SCML4Q8N228 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
SCML4Q8N228 RASA4CP-201ENST00000424092 1398 ntBASIC23.14■■□□□ 1.29
SCML4Q8N228 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC23.13■■□□□ 1.29
SCML4Q8N228 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC23.13■■□□□ 1.29
SCML4Q8N228 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SCML4Q8N228 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
SCML4Q8N228 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SCML4Q8N228 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
SCML4Q8N228 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC23.13■■□□□ 1.29
SCML4Q8N228 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC23.13■■□□□ 1.29
SCML4Q8N228 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
SCML4Q8N228 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SCML4Q8N228 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
SCML4Q8N228 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC23.13■■□□□ 1.29
SCML4Q8N228 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SCML4Q8N228 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SCML4Q8N228 GCA-201ENST00000233612 1694 ntTSL 2 BASIC23.13■■□□□ 1.29
SCML4Q8N228 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
SCML4Q8N228 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
SCML4Q8N228 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SCML4Q8N228 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SCML4Q8N228 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC23.12■■□□□ 1.29
SCML4Q8N228 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC23.12■■□□□ 1.29
SCML4Q8N228 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC23.12■■□□□ 1.29
SCML4Q8N228 AC142381.2-201ENST00000566120 298 ntBASIC23.12■■□□□ 1.29
SCML4Q8N228 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC23.12■■□□□ 1.29
SCML4Q8N228 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
SCML4Q8N228 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC23.12■■□□□ 1.29
SCML4Q8N228 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC23.12■■□□□ 1.29
SCML4Q8N228 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC23.12■■□□□ 1.29
SCML4Q8N228 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
SCML4Q8N228 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SCML4Q8N228 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SCML4Q8N228 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
SCML4Q8N228 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC23.11■■□□□ 1.29
SCML4Q8N228 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SCML4Q8N228 AC010525.1-201ENST00000585559 441 ntBASIC23.11■■□□□ 1.29
SCML4Q8N228 AL031602.1-201ENST00000633169 911 ntBASIC23.11■■□□□ 1.29
SCML4Q8N228 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC23.11■■□□□ 1.29
SCML4Q8N228 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC23.11■■□□□ 1.29
SCML4Q8N228 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC23.11■■□□□ 1.29
SCML4Q8N228 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SCML4Q8N228 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
SCML4Q8N228 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC23.1■■□□□ 1.29
SCML4Q8N228 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
SCML4Q8N228 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC23.1■■□□□ 1.29
SCML4Q8N228 AC099791.1-201ENST00000416440 715 ntBASIC23.1■■□□□ 1.29
SCML4Q8N228 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SCML4Q8N228 AP005435.1-201ENST00000529293 1178 ntBASIC23.1■■□□□ 1.29
SCML4Q8N228 AC068587.7-201ENST00000641602 218 ntBASIC23.1■■□□□ 1.29
SCML4Q8N228 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
SCML4Q8N228 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC23.1■■□□□ 1.29
SCML4Q8N228 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SCML4Q8N228 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC23.09■■□□□ 1.29
SCML4Q8N228 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC23.09■■□□□ 1.29
SCML4Q8N228 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SCML4Q8N228 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
SCML4Q8N228 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC23.09■■□□□ 1.29
SCML4Q8N228 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC23.09■■□□□ 1.29
SCML4Q8N228 AC008764.7-201ENST00000593779 1081 ntBASIC23.09■■□□□ 1.29
SCML4Q8N228 MAG-206ENST00000597035 542 ntTSL 4 BASIC23.09■■□□□ 1.29
SCML4Q8N228 CA15P2-201ENST00000611168 834 ntBASIC23.09■■□□□ 1.29
SCML4Q8N228 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
SCML4Q8N228 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC23.09■■□□□ 1.29
SCML4Q8N228 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SCML4Q8N228 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC23.09■■□□□ 1.29
SCML4Q8N228 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
SCML4Q8N228 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC23.08■■□□□ 1.29
SCML4Q8N228 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SCML4Q8N228 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SCML4Q8N228 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SCML4Q8N228 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC23.08■■□□□ 1.29
SCML4Q8N228 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
SCML4Q8N228 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC23.08■■□□□ 1.29
SCML4Q8N228 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
SCML4Q8N228 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC23.08■■□□□ 1.28
SCML4Q8N228 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC23.08■■□□□ 1.28
SCML4Q8N228 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms