Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC22.56■■□□□ 1.2
CHPFQ8IZ52 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC22.56■■□□□ 1.2
CHPFQ8IZ52 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CHPFQ8IZ52 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
CHPFQ8IZ52 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
CHPFQ8IZ52 HACD1-201ENST00000326961 773 ntTSL 2 BASIC22.56■■□□□ 1.2
CHPFQ8IZ52 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CHPFQ8IZ52 LINC01124-201ENST00000409786 2117 ntBASIC22.56■■□□□ 1.2
CHPFQ8IZ52 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC22.56■■□□□ 1.2
CHPFQ8IZ52 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CHPFQ8IZ52 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
CHPFQ8IZ52 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CHPFQ8IZ52 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CHPFQ8IZ52 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC22.56■■□□□ 1.2
CHPFQ8IZ52 RAB43-208ENST00000615093 783 ntTSL 5 BASIC22.56■■□□□ 1.2
CHPFQ8IZ52 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CHPFQ8IZ52 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC22.56■■□□□ 1.2
CHPFQ8IZ52 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
CHPFQ8IZ52 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CHPFQ8IZ52 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CHPFQ8IZ52 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC22.55■■□□□ 1.2
CHPFQ8IZ52 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CHPFQ8IZ52 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
CHPFQ8IZ52 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC22.55■■□□□ 1.2
CHPFQ8IZ52 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CHPFQ8IZ52 AL139125.2-201ENST00000623134 1869 ntBASIC22.55■■□□□ 1.2
CHPFQ8IZ52 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC22.55■■□□□ 1.2
CHPFQ8IZ52 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
CHPFQ8IZ52 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CHPFQ8IZ52 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CHPFQ8IZ52 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CHPFQ8IZ52 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC22.54■■□□□ 1.2
CHPFQ8IZ52 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CHPFQ8IZ52 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC22.54■■□□□ 1.2
CHPFQ8IZ52 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC22.54■■□□□ 1.2
CHPFQ8IZ52 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
CHPFQ8IZ52 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC22.54■■□□□ 1.2
CHPFQ8IZ52 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC22.54■■□□□ 1.2
CHPFQ8IZ52 AC123595.1-201ENST00000440769 1046 ntBASIC22.54■■□□□ 1.2
CHPFQ8IZ52 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC22.54■■□□□ 1.2
CHPFQ8IZ52 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
CHPFQ8IZ52 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CHPFQ8IZ52 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
CHPFQ8IZ52 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
CHPFQ8IZ52 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CHPFQ8IZ52 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CHPFQ8IZ52 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
CHPFQ8IZ52 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CHPFQ8IZ52 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC22.53■■□□□ 1.2
CHPFQ8IZ52 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CHPFQ8IZ52 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC22.53■■□□□ 1.2
CHPFQ8IZ52 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CHPFQ8IZ52 SHD-204ENST00000599689 1729 ntTSL 5 BASIC22.53■■□□□ 1.2
CHPFQ8IZ52 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CHPFQ8IZ52 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC22.53■■□□□ 1.2
CHPFQ8IZ52 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CHPFQ8IZ52 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC22.53■■□□□ 1.2
CHPFQ8IZ52 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
CHPFQ8IZ52 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CHPFQ8IZ52 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CHPFQ8IZ52 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CHPFQ8IZ52 LINC00543-201ENST00000567234 1845 ntBASIC22.52■■□□□ 1.2
CHPFQ8IZ52 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CHPFQ8IZ52 KRT18P5-201ENST00000436075 1291 ntBASIC22.52■■□□□ 1.2
CHPFQ8IZ52 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CHPFQ8IZ52 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC22.52■■□□□ 1.2
CHPFQ8IZ52 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC22.52■■□□□ 1.2
CHPFQ8IZ52 AP005435.1-201ENST00000529293 1178 ntBASIC22.52■■□□□ 1.2
CHPFQ8IZ52 DUX4L2-201ENST00000561772 1275 ntBASIC22.52■■□□□ 1.2
CHPFQ8IZ52 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CHPFQ8IZ52 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC22.52■■□□□ 1.2
CHPFQ8IZ52 DUX4L6-201ENST00000626483 1275 ntBASIC22.52■■□□□ 1.2
CHPFQ8IZ52 DUX4L1-201ENST00000627662 1275 ntBASIC22.52■■□□□ 1.2
CHPFQ8IZ52 DUX4L8-201ENST00000629013 1275 ntBASIC22.52■■□□□ 1.2
CHPFQ8IZ52 DUX4L3-201ENST00000630187 1275 ntBASIC22.52■■□□□ 1.2
CHPFQ8IZ52 DUX4L7-201ENST00000630678 1275 ntBASIC22.52■■□□□ 1.2
CHPFQ8IZ52 DUX4L5-201ENST00000630834 1275 ntBASIC22.52■■□□□ 1.2
CHPFQ8IZ52 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC22.52■■□□□ 1.2
CHPFQ8IZ52 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.19
CHPFQ8IZ52 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
CHPFQ8IZ52 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CHPFQ8IZ52 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CHPFQ8IZ52 LHPP-203ENST00000392757 840 ntTSL 3 BASIC22.51■■□□□ 1.19
CHPFQ8IZ52 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC22.51■■□□□ 1.19
CHPFQ8IZ52 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC22.51■■□□□ 1.19
CHPFQ8IZ52 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC22.51■■□□□ 1.19
CHPFQ8IZ52 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC22.51■■□□□ 1.19
CHPFQ8IZ52 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CHPFQ8IZ52 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC22.51■■□□□ 1.19
CHPFQ8IZ52 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC22.51■■□□□ 1.19
CHPFQ8IZ52 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CHPFQ8IZ52 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CHPFQ8IZ52 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CHPFQ8IZ52 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CHPFQ8IZ52 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC22.5■■□□□ 1.19
CHPFQ8IZ52 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CHPFQ8IZ52 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC22.5■■□□□ 1.19
CHPFQ8IZ52 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CHPFQ8IZ52 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CHPFQ8IZ52 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC22.5■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms