Protein–RNA interactions for Protein: Q8IYK2

CCDC105, Coiled-coil domain-containing protein 105, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC105Q8IYK2 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
CCDC105Q8IYK2 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC23.7■■□□□ 1.39
CCDC105Q8IYK2 SYT6-210ENST00000641643 1587 ntBASIC23.7■■□□□ 1.38
CCDC105Q8IYK2 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
CCDC105Q8IYK2 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC23.7■■□□□ 1.38
CCDC105Q8IYK2 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
CCDC105Q8IYK2 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CCDC105Q8IYK2 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CCDC105Q8IYK2 AC027682.1-201ENST00000562846 899 ntBASIC23.7■■□□□ 1.38
CCDC105Q8IYK2 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC23.7■■□□□ 1.38
CCDC105Q8IYK2 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC23.7■■□□□ 1.38
CCDC105Q8IYK2 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
CCDC105Q8IYK2 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CCDC105Q8IYK2 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC23.7■■□□□ 1.38
CCDC105Q8IYK2 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
CCDC105Q8IYK2 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CCDC105Q8IYK2 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
CCDC105Q8IYK2 PTMA-205ENST00000410064 814 ntTSL 2 BASIC23.69■■□□□ 1.38
CCDC105Q8IYK2 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC23.69■■□□□ 1.38
CCDC105Q8IYK2 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
CCDC105Q8IYK2 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC23.69■■□□□ 1.38
CCDC105Q8IYK2 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CCDC105Q8IYK2 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CCDC105Q8IYK2 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC23.68■■□□□ 1.38
CCDC105Q8IYK2 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
CCDC105Q8IYK2 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CCDC105Q8IYK2 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
CCDC105Q8IYK2 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
CCDC105Q8IYK2 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
CCDC105Q8IYK2 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC23.68■■□□□ 1.38
CCDC105Q8IYK2 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC23.68■■□□□ 1.38
CCDC105Q8IYK2 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CCDC105Q8IYK2 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
CCDC105Q8IYK2 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC23.68■■□□□ 1.38
CCDC105Q8IYK2 AC092171.4-201ENST00000609130 632 ntBASIC23.68■■□□□ 1.38
CCDC105Q8IYK2 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
CCDC105Q8IYK2 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC23.68■■□□□ 1.38
CCDC105Q8IYK2 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CCDC105Q8IYK2 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CCDC105Q8IYK2 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
CCDC105Q8IYK2 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CCDC105Q8IYK2 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CCDC105Q8IYK2 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC23.67■■□□□ 1.38
CCDC105Q8IYK2 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC23.67■■□□□ 1.38
CCDC105Q8IYK2 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC23.67■■□□□ 1.38
CCDC105Q8IYK2 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CCDC105Q8IYK2 AC092068.2-201ENST00000590491 1708 ntBASIC23.67■■□□□ 1.38
CCDC105Q8IYK2 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CCDC105Q8IYK2 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
CCDC105Q8IYK2 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
CCDC105Q8IYK2 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC23.66■■□□□ 1.38
CCDC105Q8IYK2 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC23.66■■□□□ 1.38
CCDC105Q8IYK2 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CCDC105Q8IYK2 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
CCDC105Q8IYK2 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CCDC105Q8IYK2 JTB-203ENST00000368589 1216 ntTSL 2 BASIC23.66■■□□□ 1.38
CCDC105Q8IYK2 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CCDC105Q8IYK2 AL117328.2-201ENST00000624617 1940 ntBASIC23.66■■□□□ 1.38
CCDC105Q8IYK2 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CCDC105Q8IYK2 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CCDC105Q8IYK2 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CCDC105Q8IYK2 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CCDC105Q8IYK2 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CCDC105Q8IYK2 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CCDC105Q8IYK2 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CCDC105Q8IYK2 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC23.65■■□□□ 1.38
CCDC105Q8IYK2 IKBKGP1-201ENST00000612193 1073 ntBASIC23.65■■□□□ 1.38
CCDC105Q8IYK2 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CCDC105Q8IYK2 DUSP8P3-201ENST00000399571 1760 ntBASIC23.65■■□□□ 1.38
CCDC105Q8IYK2 AC233723.2-201ENST00000623798 2106 ntBASIC23.65■■□□□ 1.38
CCDC105Q8IYK2 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
CCDC105Q8IYK2 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
CCDC105Q8IYK2 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
CCDC105Q8IYK2 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
CCDC105Q8IYK2 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
CCDC105Q8IYK2 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
CCDC105Q8IYK2 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
CCDC105Q8IYK2 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CCDC105Q8IYK2 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.37
CCDC105Q8IYK2 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CCDC105Q8IYK2 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC23.64■■□□□ 1.37
CCDC105Q8IYK2 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
CCDC105Q8IYK2 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CCDC105Q8IYK2 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC23.64■■□□□ 1.37
CCDC105Q8IYK2 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC23.63■■□□□ 1.37
CCDC105Q8IYK2 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC23.63■■□□□ 1.37
CCDC105Q8IYK2 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC23.63■■□□□ 1.37
CCDC105Q8IYK2 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CCDC105Q8IYK2 AL137784.2-201ENST00000607332 1000 ntBASIC23.63■■□□□ 1.37
CCDC105Q8IYK2 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
CCDC105Q8IYK2 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
CCDC105Q8IYK2 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CCDC105Q8IYK2 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
CCDC105Q8IYK2 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC23.62■■□□□ 1.37
CCDC105Q8IYK2 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC23.62■■□□□ 1.37
CCDC105Q8IYK2 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
CCDC105Q8IYK2 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CCDC105Q8IYK2 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CCDC105Q8IYK2 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC23.62■■□□□ 1.37
CCDC105Q8IYK2 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms