Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRRC28Q86X40 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.62■□□□□ 0.73
LRRC28Q86X40 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
LRRC28Q86X40 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRRC28Q86X40 AC090877.2-201ENST00000558441 1738 ntBASIC19.62■□□□□ 0.73
LRRC28Q86X40 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LRRC28Q86X40 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LRRC28Q86X40 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRRC28Q86X40 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.61■□□□□ 0.73
LRRC28Q86X40 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LRRC28Q86X40 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRRC28Q86X40 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LRRC28Q86X40 GUSBP5-201ENST00000418136 578 ntBASIC19.61■□□□□ 0.73
LRRC28Q86X40 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.61■□□□□ 0.73
LRRC28Q86X40 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.61■□□□□ 0.73
LRRC28Q86X40 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
LRRC28Q86X40 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRRC28Q86X40 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LRRC28Q86X40 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.6■□□□□ 0.73
LRRC28Q86X40 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LRRC28Q86X40 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.6■□□□□ 0.73
LRRC28Q86X40 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRRC28Q86X40 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.6■□□□□ 0.73
LRRC28Q86X40 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LRRC28Q86X40 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRRC28Q86X40 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
LRRC28Q86X40 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
LRRC28Q86X40 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LRRC28Q86X40 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRRC28Q86X40 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRRC28Q86X40 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
LRRC28Q86X40 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.6■□□□□ 0.73
LRRC28Q86X40 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
LRRC28Q86X40 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
LRRC28Q86X40 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LRRC28Q86X40 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.6■□□□□ 0.73
LRRC28Q86X40 SLC25A24-204ENST00000569674 2357 ntBASIC19.59■□□□□ 0.73
LRRC28Q86X40 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
LRRC28Q86X40 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRRC28Q86X40 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.59■□□□□ 0.73
LRRC28Q86X40 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.59■□□□□ 0.73
LRRC28Q86X40 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRRC28Q86X40 C11orf96-202ENST00000528572 1834 ntBASIC19.59■□□□□ 0.73
LRRC28Q86X40 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRRC28Q86X40 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRRC28Q86X40 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRRC28Q86X40 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRRC28Q86X40 AC021242.3-201ENST00000607598 1377 ntBASIC19.58■□□□□ 0.73
LRRC28Q86X40 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.58■□□□□ 0.73
LRRC28Q86X40 AC092053.2-201ENST00000640557 1818 ntBASIC19.58■□□□□ 0.73
LRRC28Q86X40 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LRRC28Q86X40 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.58■□□□□ 0.73
LRRC28Q86X40 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.58■□□□□ 0.73
LRRC28Q86X40 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
LRRC28Q86X40 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.58■□□□□ 0.72
LRRC28Q86X40 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.58■□□□□ 0.72
LRRC28Q86X40 MIR4787-201ENST00000607364 84 ntBASIC19.58■□□□□ 0.72
LRRC28Q86X40 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LRRC28Q86X40 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LRRC28Q86X40 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
LRRC28Q86X40 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
LRRC28Q86X40 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
LRRC28Q86X40 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LRRC28Q86X40 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.57■□□□□ 0.72
LRRC28Q86X40 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.57■□□□□ 0.72
LRRC28Q86X40 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
LRRC28Q86X40 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRRC28Q86X40 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.56■□□□□ 0.72
LRRC28Q86X40 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRRC28Q86X40 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.56■□□□□ 0.72
LRRC28Q86X40 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.56■□□□□ 0.72
LRRC28Q86X40 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRRC28Q86X40 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRRC28Q86X40 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LRRC28Q86X40 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
LRRC28Q86X40 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.56■□□□□ 0.72
LRRC28Q86X40 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
LRRC28Q86X40 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRRC28Q86X40 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
LRRC28Q86X40 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRRC28Q86X40 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
LRRC28Q86X40 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRRC28Q86X40 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.55■□□□□ 0.72
LRRC28Q86X40 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.55■□□□□ 0.72
LRRC28Q86X40 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LRRC28Q86X40 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRRC28Q86X40 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRRC28Q86X40 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRRC28Q86X40 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRRC28Q86X40 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.55■□□□□ 0.72
LRRC28Q86X40 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.55■□□□□ 0.72
LRRC28Q86X40 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
LRRC28Q86X40 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.55■□□□□ 0.72
LRRC28Q86X40 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
LRRC28Q86X40 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LRRC28Q86X40 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRRC28Q86X40 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LRRC28Q86X40 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.54■□□□□ 0.72
LRRC28Q86X40 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LRRC28Q86X40 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms