Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRRTM1Q86UE6 MIR4281-201ENST00000580852 62 ntBASIC19.21■□□□□ 0.67
LRRTM1Q86UE6 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRRTM1Q86UE6 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
LRRTM1Q86UE6 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.21■□□□□ 0.67
LRRTM1Q86UE6 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.2■□□□□ 0.66
LRRTM1Q86UE6 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LRRTM1Q86UE6 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRRTM1Q86UE6 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRRTM1Q86UE6 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LRRTM1Q86UE6 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC19.2■□□□□ 0.66
LRRTM1Q86UE6 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.2■□□□□ 0.66
LRRTM1Q86UE6 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRRTM1Q86UE6 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
LRRTM1Q86UE6 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
LRRTM1Q86UE6 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LRRTM1Q86UE6 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
LRRTM1Q86UE6 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRRTM1Q86UE6 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRRTM1Q86UE6 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
LRRTM1Q86UE6 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
LRRTM1Q86UE6 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRRTM1Q86UE6 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
LRRTM1Q86UE6 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.19■□□□□ 0.66
LRRTM1Q86UE6 AC144652.1-201ENST00000609974 1624 ntBASIC19.19■□□□□ 0.66
LRRTM1Q86UE6 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
LRRTM1Q86UE6 AC139795.1-202ENST00000500444 432 ntBASIC19.19■□□□□ 0.66
LRRTM1Q86UE6 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LRRTM1Q86UE6 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.19■□□□□ 0.66
LRRTM1Q86UE6 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.19■□□□□ 0.66
LRRTM1Q86UE6 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRRTM1Q86UE6 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LRRTM1Q86UE6 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRRTM1Q86UE6 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRRTM1Q86UE6 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRRTM1Q86UE6 KRT18P24-201ENST00000344739 1156 ntBASIC19.18■□□□□ 0.66
LRRTM1Q86UE6 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LRRTM1Q86UE6 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRRTM1Q86UE6 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC19.18■□□□□ 0.66
LRRTM1Q86UE6 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRRTM1Q86UE6 THA1P-201ENST00000590384 1145 ntBASIC19.18■□□□□ 0.66
LRRTM1Q86UE6 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
LRRTM1Q86UE6 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRRTM1Q86UE6 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.18■□□□□ 0.66
LRRTM1Q86UE6 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LRRTM1Q86UE6 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
LRRTM1Q86UE6 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LRRTM1Q86UE6 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.17■□□□□ 0.66
LRRTM1Q86UE6 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRRTM1Q86UE6 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
LRRTM1Q86UE6 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.17■□□□□ 0.66
LRRTM1Q86UE6 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRRTM1Q86UE6 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.17■□□□□ 0.66
LRRTM1Q86UE6 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRRTM1Q86UE6 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRRTM1Q86UE6 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.17■□□□□ 0.66
LRRTM1Q86UE6 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
LRRTM1Q86UE6 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.17■□□□□ 0.66
LRRTM1Q86UE6 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC19.17■□□□□ 0.66
LRRTM1Q86UE6 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRRTM1Q86UE6 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LRRTM1Q86UE6 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRRTM1Q86UE6 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
LRRTM1Q86UE6 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRRTM1Q86UE6 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LRRTM1Q86UE6 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LRRTM1Q86UE6 IDNK-201ENST00000376417 511 ntTSL 5 BASIC19.16■□□□□ 0.66
LRRTM1Q86UE6 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRRTM1Q86UE6 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC19.16■□□□□ 0.66
LRRTM1Q86UE6 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC19.16■□□□□ 0.66
LRRTM1Q86UE6 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.16■□□□□ 0.66
LRRTM1Q86UE6 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.16■□□□□ 0.66
LRRTM1Q86UE6 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.16■□□□□ 0.66
LRRTM1Q86UE6 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRRTM1Q86UE6 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRRTM1Q86UE6 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRRTM1Q86UE6 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.15■□□□□ 0.66
LRRTM1Q86UE6 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LRRTM1Q86UE6 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
LRRTM1Q86UE6 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.15■□□□□ 0.66
LRRTM1Q86UE6 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRRTM1Q86UE6 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRRTM1Q86UE6 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRRTM1Q86UE6 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
LRRTM1Q86UE6 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRRTM1Q86UE6 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC19.15■□□□□ 0.66
LRRTM1Q86UE6 DUX4L18-201ENST00000553347 1267 ntBASIC19.15■□□□□ 0.66
LRRTM1Q86UE6 AC026310.3-201ENST00000625186 2373 ntBASIC19.15■□□□□ 0.66
LRRTM1Q86UE6 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRRTM1Q86UE6 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.14■□□□□ 0.66
LRRTM1Q86UE6 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LRRTM1Q86UE6 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.14■□□□□ 0.65
LRRTM1Q86UE6 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
LRRTM1Q86UE6 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
LRRTM1Q86UE6 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LRRTM1Q86UE6 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC19.14■□□□□ 0.65
LRRTM1Q86UE6 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LRRTM1Q86UE6 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC19.14■□□□□ 0.65
LRRTM1Q86UE6 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
LRRTM1Q86UE6 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms