Protein–RNA interactions for Protein: Q86TM6

SYVN1, E3 ubiquitin-protein ligase synoviolin, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1Q86TM6 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
SYVN1Q86TM6 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.74■■□□□ 1.07
SYVN1Q86TM6 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SYVN1Q86TM6 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SYVN1Q86TM6 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SYVN1Q86TM6 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC21.74■■□□□ 1.07
SYVN1Q86TM6 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SYVN1Q86TM6 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SYVN1Q86TM6 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SYVN1Q86TM6 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
SYVN1Q86TM6 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
SYVN1Q86TM6 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SYVN1Q86TM6 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
SYVN1Q86TM6 GUSBP5-202ENST00000510805 1989 ntBASIC21.74■■□□□ 1.07
SYVN1Q86TM6 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.74■■□□□ 1.07
SYVN1Q86TM6 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.74■■□□□ 1.07
SYVN1Q86TM6 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SYVN1Q86TM6 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.73■■□□□ 1.07
SYVN1Q86TM6 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC21.73■■□□□ 1.07
SYVN1Q86TM6 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SYVN1Q86TM6 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SYVN1Q86TM6 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SYVN1Q86TM6 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
SYVN1Q86TM6 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SYVN1Q86TM6 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SYVN1Q86TM6 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.72■■□□□ 1.07
SYVN1Q86TM6 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.72■■□□□ 1.07
SYVN1Q86TM6 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.72■■□□□ 1.07
SYVN1Q86TM6 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC21.72■■□□□ 1.07
SYVN1Q86TM6 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.72■■□□□ 1.07
SYVN1Q86TM6 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SYVN1Q86TM6 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SYVN1Q86TM6 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SYVN1Q86TM6 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.72■■□□□ 1.07
SYVN1Q86TM6 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SYVN1Q86TM6 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
SYVN1Q86TM6 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SYVN1Q86TM6 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.71■■□□□ 1.07
SYVN1Q86TM6 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.71■■□□□ 1.07
SYVN1Q86TM6 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
SYVN1Q86TM6 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SYVN1Q86TM6 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
SYVN1Q86TM6 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
SYVN1Q86TM6 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SYVN1Q86TM6 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.07
SYVN1Q86TM6 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.7■■□□□ 1.06
SYVN1Q86TM6 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
SYVN1Q86TM6 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SYVN1Q86TM6 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SYVN1Q86TM6 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
SYVN1Q86TM6 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
SYVN1Q86TM6 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.7■■□□□ 1.06
SYVN1Q86TM6 AC106739.1-201ENST00000617035 715 ntBASIC21.7■■□□□ 1.06
SYVN1Q86TM6 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
SYVN1Q86TM6 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SYVN1Q86TM6 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
SYVN1Q86TM6 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SYVN1Q86TM6 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SYVN1Q86TM6 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.69■■□□□ 1.06
SYVN1Q86TM6 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SYVN1Q86TM6 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SYVN1Q86TM6 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC21.69■■□□□ 1.06
SYVN1Q86TM6 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.69■■□□□ 1.06
SYVN1Q86TM6 SRD5A1P1-201ENST00000442297 786 ntBASIC21.69■■□□□ 1.06
SYVN1Q86TM6 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SYVN1Q86TM6 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
SYVN1Q86TM6 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.69■■□□□ 1.06
SYVN1Q86TM6 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
SYVN1Q86TM6 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.69■■□□□ 1.06
SYVN1Q86TM6 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SYVN1Q86TM6 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SYVN1Q86TM6 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SYVN1Q86TM6 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SYVN1Q86TM6 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SYVN1Q86TM6 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.68■■□□□ 1.06
SYVN1Q86TM6 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SYVN1Q86TM6 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SYVN1Q86TM6 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SYVN1Q86TM6 PBX2P1-201ENST00000493219 1291 ntBASIC21.68■■□□□ 1.06
SYVN1Q86TM6 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
SYVN1Q86TM6 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
SYVN1Q86TM6 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
SYVN1Q86TM6 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.67■■□□□ 1.06
SYVN1Q86TM6 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.67■■□□□ 1.06
SYVN1Q86TM6 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SYVN1Q86TM6 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC21.67■■□□□ 1.06
SYVN1Q86TM6 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SYVN1Q86TM6 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
SYVN1Q86TM6 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.67■■□□□ 1.06
SYVN1Q86TM6 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.67■■□□□ 1.06
SYVN1Q86TM6 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SYVN1Q86TM6 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.66■■□□□ 1.06
SYVN1Q86TM6 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SYVN1Q86TM6 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
SYVN1Q86TM6 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
SYVN1Q86TM6 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC21.66■■□□□ 1.06
SYVN1Q86TM6 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.66■■□□□ 1.06
SYVN1Q86TM6 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.66■■□□□ 1.06
SYVN1Q86TM6 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SYVN1Q86TM6 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms