Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 AC004854.2-201ENST00000608450 1441 ntBASIC13.84□□□□□ -0.19
VPS13BQ7Z7G8 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC13.84□□□□□ -0.19
VPS13BQ7Z7G8 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
VPS13BQ7Z7G8 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VPS13BQ7Z7G8 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC13.84□□□□□ -0.19
VPS13BQ7Z7G8 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
VPS13BQ7Z7G8 EI24-213ENST00000618552 1747 ntTSL 5 BASIC13.84□□□□□ -0.19
VPS13BQ7Z7G8 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VPS13BQ7Z7G8 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VPS13BQ7Z7G8 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VPS13BQ7Z7G8 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC13.84□□□□□ -0.19
VPS13BQ7Z7G8 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC13.84□□□□□ -0.19
VPS13BQ7Z7G8 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC13.84□□□□□ -0.19
VPS13BQ7Z7G8 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
VPS13BQ7Z7G8 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
VPS13BQ7Z7G8 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC13.83□□□□□ -0.19
VPS13BQ7Z7G8 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
VPS13BQ7Z7G8 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC13.83□□□□□ -0.19
VPS13BQ7Z7G8 PARP1-210ENST00000629232 477 ntTSL 5 BASIC13.83□□□□□ -0.19
VPS13BQ7Z7G8 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VPS13BQ7Z7G8 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
VPS13BQ7Z7G8 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
VPS13BQ7Z7G8 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
VPS13BQ7Z7G8 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
VPS13BQ7Z7G8 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
VPS13BQ7Z7G8 SLC7A5P2-201ENST00000553010 536 ntBASIC13.83□□□□□ -0.2
VPS13BQ7Z7G8 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC13.83□□□□□ -0.2
VPS13BQ7Z7G8 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
VPS13BQ7Z7G8 TFG-210ENST00000620299 1289 ntTSL 5 BASIC13.83□□□□□ -0.2
VPS13BQ7Z7G8 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VPS13BQ7Z7G8 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
VPS13BQ7Z7G8 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC13.83□□□□□ -0.2
VPS13BQ7Z7G8 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VPS13BQ7Z7G8 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VPS13BQ7Z7G8 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC13.83□□□□□ -0.2
VPS13BQ7Z7G8 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VPS13BQ7Z7G8 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC13.83□□□□□ -0.2
VPS13BQ7Z7G8 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC13.83□□□□□ -0.2
VPS13BQ7Z7G8 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
VPS13BQ7Z7G8 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
VPS13BQ7Z7G8 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VPS13BQ7Z7G8 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
VPS13BQ7Z7G8 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
VPS13BQ7Z7G8 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VPS13BQ7Z7G8 AC138932.3-201ENST00000567634 1902 ntBASIC13.82□□□□□ -0.2
VPS13BQ7Z7G8 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
VPS13BQ7Z7G8 AC098934.4-201ENST00000564127 592 ntBASIC13.82□□□□□ -0.2
VPS13BQ7Z7G8 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
VPS13BQ7Z7G8 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
VPS13BQ7Z7G8 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
VPS13BQ7Z7G8 GALNS-213ENST00000569433 723 ntTSL 3 BASIC13.82□□□□□ -0.2
VPS13BQ7Z7G8 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC13.82□□□□□ -0.2
VPS13BQ7Z7G8 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
VPS13BQ7Z7G8 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VPS13BQ7Z7G8 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
VPS13BQ7Z7G8 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
VPS13BQ7Z7G8 MED17-227ENST00000640521 2047 ntTSL 5 BASIC13.82□□□□□ -0.2
VPS13BQ7Z7G8 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
VPS13BQ7Z7G8 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
VPS13BQ7Z7G8 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
VPS13BQ7Z7G8 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC13.81□□□□□ -0.2
VPS13BQ7Z7G8 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
VPS13BQ7Z7G8 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC13.81□□□□□ -0.2
VPS13BQ7Z7G8 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
VPS13BQ7Z7G8 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC13.81□□□□□ -0.2
VPS13BQ7Z7G8 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VPS13BQ7Z7G8 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC13.81□□□□□ -0.2
VPS13BQ7Z7G8 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC13.81□□□□□ -0.2
VPS13BQ7Z7G8 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC13.81□□□□□ -0.2
VPS13BQ7Z7G8 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC13.81□□□□□ -0.2
VPS13BQ7Z7G8 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC13.81□□□□□ -0.2
VPS13BQ7Z7G8 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC13.81□□□□□ -0.2
VPS13BQ7Z7G8 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
VPS13BQ7Z7G8 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
VPS13BQ7Z7G8 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VPS13BQ7Z7G8 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
VPS13BQ7Z7G8 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VPS13BQ7Z7G8 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
VPS13BQ7Z7G8 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC13.8□□□□□ -0.2
VPS13BQ7Z7G8 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
VPS13BQ7Z7G8 AC069152.1-201ENST00000438030 544 ntBASIC13.8□□□□□ -0.2
VPS13BQ7Z7G8 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
VPS13BQ7Z7G8 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VPS13BQ7Z7G8 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
VPS13BQ7Z7G8 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC13.8□□□□□ -0.2
VPS13BQ7Z7G8 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC13.8□□□□□ -0.2
VPS13BQ7Z7G8 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
VPS13BQ7Z7G8 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VPS13BQ7Z7G8 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
VPS13BQ7Z7G8 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VPS13BQ7Z7G8 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC13.8□□□□□ -0.2
VPS13BQ7Z7G8 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
VPS13BQ7Z7G8 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC13.8□□□□□ -0.2
VPS13BQ7Z7G8 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC13.8□□□□□ -0.2
VPS13BQ7Z7G8 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC13.8□□□□□ -0.2
VPS13BQ7Z7G8 BID-214ENST00000617586 542 ntTSL 5 BASIC13.8□□□□□ -0.2
VPS13BQ7Z7G8 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VPS13BQ7Z7G8 AL161729.1-201ENST00000604104 1402 ntBASIC13.8□□□□□ -0.2
VPS13BQ7Z7G8 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VPS13BQ7Z7G8 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms