Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.12■□□□□ 0.65
COLCA1Q6ZS62 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
COLCA1Q6ZS62 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
COLCA1Q6ZS62 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.12■□□□□ 0.65
COLCA1Q6ZS62 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COLCA1Q6ZS62 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COLCA1Q6ZS62 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
COLCA1Q6ZS62 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COLCA1Q6ZS62 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.12■□□□□ 0.65
COLCA1Q6ZS62 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
COLCA1Q6ZS62 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
COLCA1Q6ZS62 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.12■□□□□ 0.65
COLCA1Q6ZS62 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
COLCA1Q6ZS62 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COLCA1Q6ZS62 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
COLCA1Q6ZS62 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COLCA1Q6ZS62 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.11■□□□□ 0.65
COLCA1Q6ZS62 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
COLCA1Q6ZS62 AC006455.2-201ENST00000429931 906 ntBASIC19.11■□□□□ 0.65
COLCA1Q6ZS62 AC131281.2-201ENST00000520478 145 ntBASIC19.11■□□□□ 0.65
COLCA1Q6ZS62 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.11■□□□□ 0.65
COLCA1Q6ZS62 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COLCA1Q6ZS62 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.11■□□□□ 0.65
COLCA1Q6ZS62 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.11■□□□□ 0.65
COLCA1Q6ZS62 AC092171.4-201ENST00000609130 632 ntBASIC19.11■□□□□ 0.65
COLCA1Q6ZS62 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.11■□□□□ 0.65
COLCA1Q6ZS62 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.11■□□□□ 0.65
COLCA1Q6ZS62 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.11■□□□□ 0.65
COLCA1Q6ZS62 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.11■□□□□ 0.65
COLCA1Q6ZS62 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
COLCA1Q6ZS62 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
COLCA1Q6ZS62 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COLCA1Q6ZS62 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.11■□□□□ 0.65
COLCA1Q6ZS62 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
COLCA1Q6ZS62 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COLCA1Q6ZS62 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
COLCA1Q6ZS62 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.11■□□□□ 0.65
COLCA1Q6ZS62 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.1■□□□□ 0.65
COLCA1Q6ZS62 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COLCA1Q6ZS62 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
COLCA1Q6ZS62 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.1■□□□□ 0.65
COLCA1Q6ZS62 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
COLCA1Q6ZS62 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COLCA1Q6ZS62 AC233723.2-201ENST00000623798 2106 ntBASIC19.1■□□□□ 0.65
COLCA1Q6ZS62 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
COLCA1Q6ZS62 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COLCA1Q6ZS62 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
COLCA1Q6ZS62 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
COLCA1Q6ZS62 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
COLCA1Q6ZS62 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.09■□□□□ 0.65
COLCA1Q6ZS62 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COLCA1Q6ZS62 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.09■□□□□ 0.65
COLCA1Q6ZS62 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.09■□□□□ 0.65
COLCA1Q6ZS62 AC004687.1-201ENST00000579003 1625 ntBASIC19.09■□□□□ 0.65
COLCA1Q6ZS62 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
COLCA1Q6ZS62 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COLCA1Q6ZS62 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
COLCA1Q6ZS62 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
COLCA1Q6ZS62 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
COLCA1Q6ZS62 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.08■□□□□ 0.65
COLCA1Q6ZS62 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
COLCA1Q6ZS62 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
COLCA1Q6ZS62 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
COLCA1Q6ZS62 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
COLCA1Q6ZS62 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
COLCA1Q6ZS62 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
COLCA1Q6ZS62 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.08■□□□□ 0.64
COLCA1Q6ZS62 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.08■□□□□ 0.64
COLCA1Q6ZS62 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.64
COLCA1Q6ZS62 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
COLCA1Q6ZS62 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.08■□□□□ 0.64
COLCA1Q6ZS62 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC19.08■□□□□ 0.64
COLCA1Q6ZS62 AC127496.7-201ENST00000625110 1798 ntBASIC19.08■□□□□ 0.64
COLCA1Q6ZS62 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
COLCA1Q6ZS62 AC087742.1-201ENST00000575880 1738 ntBASIC19.08■□□□□ 0.64
COLCA1Q6ZS62 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
COLCA1Q6ZS62 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
COLCA1Q6ZS62 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COLCA1Q6ZS62 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COLCA1Q6ZS62 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
COLCA1Q6ZS62 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COLCA1Q6ZS62 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COLCA1Q6ZS62 MIR3181-201ENST00000578512 73 ntBASIC19.07■□□□□ 0.64
COLCA1Q6ZS62 pRNA.6-201ENST00000610482 90 ntBASIC19.07■□□□□ 0.64
COLCA1Q6ZS62 pRNA.5-201ENST00000612139 90 ntBASIC19.07■□□□□ 0.64
COLCA1Q6ZS62 pRNA.11-201ENST00000618423 90 ntBASIC19.07■□□□□ 0.64
COLCA1Q6ZS62 pRNA.13-201ENST00000619112 90 ntBASIC19.07■□□□□ 0.64
COLCA1Q6ZS62 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COLCA1Q6ZS62 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
COLCA1Q6ZS62 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
COLCA1Q6ZS62 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.06■□□□□ 0.64
COLCA1Q6ZS62 AC133637.1-201ENST00000624115 1537 ntBASIC19.06■□□□□ 0.64
COLCA1Q6ZS62 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
COLCA1Q6ZS62 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
COLCA1Q6ZS62 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COLCA1Q6ZS62 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
COLCA1Q6ZS62 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.06■□□□□ 0.64
COLCA1Q6ZS62 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.06■□□□□ 0.64
COLCA1Q6ZS62 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.06■□□□□ 0.64
COLCA1Q6ZS62 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms