Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC22.96■■□□□ 1.27
FOXR1Q6PIV2 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
FOXR1Q6PIV2 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC22.96■■□□□ 1.27
FOXR1Q6PIV2 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
FOXR1Q6PIV2 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC22.96■■□□□ 1.27
FOXR1Q6PIV2 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
FOXR1Q6PIV2 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC22.96■■□□□ 1.27
FOXR1Q6PIV2 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
FOXR1Q6PIV2 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
FOXR1Q6PIV2 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
FOXR1Q6PIV2 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
FOXR1Q6PIV2 KRT18P24-201ENST00000344739 1156 ntBASIC22.95■■□□□ 1.26
FOXR1Q6PIV2 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
FOXR1Q6PIV2 COMT-203ENST00000403184 2217 ntTSL 2 BASIC22.95■■□□□ 1.26
FOXR1Q6PIV2 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
FOXR1Q6PIV2 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC22.95■■□□□ 1.26
FOXR1Q6PIV2 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.26
FOXR1Q6PIV2 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC22.95■■□□□ 1.26
FOXR1Q6PIV2 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC22.95■■□□□ 1.26
FOXR1Q6PIV2 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC22.95■■□□□ 1.26
FOXR1Q6PIV2 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC22.95■■□□□ 1.26
FOXR1Q6PIV2 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC22.94■■□□□ 1.26
FOXR1Q6PIV2 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC22.94■■□□□ 1.26
FOXR1Q6PIV2 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC22.94■■□□□ 1.26
FOXR1Q6PIV2 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
FOXR1Q6PIV2 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
FOXR1Q6PIV2 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC22.94■■□□□ 1.26
FOXR1Q6PIV2 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC22.94■■□□□ 1.26
FOXR1Q6PIV2 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC22.94■■□□□ 1.26
FOXR1Q6PIV2 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
FOXR1Q6PIV2 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
FOXR1Q6PIV2 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
FOXR1Q6PIV2 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
FOXR1Q6PIV2 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
FOXR1Q6PIV2 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
FOXR1Q6PIV2 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
FOXR1Q6PIV2 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC22.93■■□□□ 1.26
FOXR1Q6PIV2 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC22.93■■□□□ 1.26
FOXR1Q6PIV2 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
FOXR1Q6PIV2 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
FOXR1Q6PIV2 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
FOXR1Q6PIV2 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC22.93■■□□□ 1.26
FOXR1Q6PIV2 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC22.93■■□□□ 1.26
FOXR1Q6PIV2 AC120024.1-201ENST00000562672 995 ntBASIC22.93■■□□□ 1.26
FOXR1Q6PIV2 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC22.93■■□□□ 1.26
FOXR1Q6PIV2 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC22.93■■□□□ 1.26
FOXR1Q6PIV2 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
FOXR1Q6PIV2 FBXW4P1-201ENST00000426721 2239 ntBASIC22.93■■□□□ 1.26
FOXR1Q6PIV2 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC22.92■■□□□ 1.26
FOXR1Q6PIV2 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
FOXR1Q6PIV2 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC22.92■■□□□ 1.26
FOXR1Q6PIV2 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC22.92■■□□□ 1.26
FOXR1Q6PIV2 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
FOXR1Q6PIV2 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
FOXR1Q6PIV2 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
FOXR1Q6PIV2 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC22.92■■□□□ 1.26
FOXR1Q6PIV2 AC242852.2-201ENST00000615738 1807 ntBASIC22.92■■□□□ 1.26
FOXR1Q6PIV2 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC22.91■■□□□ 1.26
FOXR1Q6PIV2 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
FOXR1Q6PIV2 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC22.91■■□□□ 1.26
FOXR1Q6PIV2 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
FOXR1Q6PIV2 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC22.91■■□□□ 1.26
FOXR1Q6PIV2 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC22.91■■□□□ 1.26
FOXR1Q6PIV2 TRIR-202ENST00000588213 841 ntTSL 3 BASIC22.91■■□□□ 1.26
FOXR1Q6PIV2 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
FOXR1Q6PIV2 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
FOXR1Q6PIV2 AC092068.2-201ENST00000590491 1708 ntBASIC22.91■■□□□ 1.26
FOXR1Q6PIV2 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
FOXR1Q6PIV2 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
FOXR1Q6PIV2 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
FOXR1Q6PIV2 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC22.9■■□□□ 1.26
FOXR1Q6PIV2 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC22.9■■□□□ 1.26
FOXR1Q6PIV2 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
FOXR1Q6PIV2 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
FOXR1Q6PIV2 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
FOXR1Q6PIV2 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC22.89■■□□□ 1.26
FOXR1Q6PIV2 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.26
FOXR1Q6PIV2 AC026310.3-201ENST00000625186 2373 ntBASIC22.89■■□□□ 1.26
FOXR1Q6PIV2 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.25
FOXR1Q6PIV2 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC22.89■■□□□ 1.25
FOXR1Q6PIV2 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
FOXR1Q6PIV2 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
FOXR1Q6PIV2 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
FOXR1Q6PIV2 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
FOXR1Q6PIV2 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
FOXR1Q6PIV2 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
FOXR1Q6PIV2 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
FOXR1Q6PIV2 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC22.88■■□□□ 1.25
FOXR1Q6PIV2 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC22.88■■□□□ 1.25
FOXR1Q6PIV2 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC22.88■■□□□ 1.25
FOXR1Q6PIV2 PALM-208ENST00000592155 2272 ntTSL 4 BASIC22.88■■□□□ 1.25
FOXR1Q6PIV2 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
FOXR1Q6PIV2 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
FOXR1Q6PIV2 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
FOXR1Q6PIV2 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC22.87■■□□□ 1.25
FOXR1Q6PIV2 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC22.87■■□□□ 1.25
FOXR1Q6PIV2 AC137630.3-201ENST00000607245 391 ntBASIC22.87■■□□□ 1.25
FOXR1Q6PIV2 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
FOXR1Q6PIV2 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
FOXR1Q6PIV2 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC22.87■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms