Protein–RNA interactions for Protein: Q6PHR2

ULK3, Serine/threonine-protein kinase ULK3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ULK3Q6PHR2 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ULK3Q6PHR2 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.23■□□□□ 0.83
ULK3Q6PHR2 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ULK3Q6PHR2 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ULK3Q6PHR2 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ULK3Q6PHR2 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
ULK3Q6PHR2 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
ULK3Q6PHR2 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ULK3Q6PHR2 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
ULK3Q6PHR2 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.23■□□□□ 0.83
ULK3Q6PHR2 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.23■□□□□ 0.83
ULK3Q6PHR2 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ULK3Q6PHR2 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
ULK3Q6PHR2 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ULK3Q6PHR2 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
ULK3Q6PHR2 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ULK3Q6PHR2 GUSBP5-202ENST00000510805 1989 ntBASIC20.23■□□□□ 0.83
ULK3Q6PHR2 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ULK3Q6PHR2 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ULK3Q6PHR2 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ULK3Q6PHR2 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.22■□□□□ 0.83
ULK3Q6PHR2 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
ULK3Q6PHR2 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ULK3Q6PHR2 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.22■□□□□ 0.83
ULK3Q6PHR2 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.22■□□□□ 0.83
ULK3Q6PHR2 UNC93B8-201ENST00000511903 705 ntBASIC20.22■□□□□ 0.83
ULK3Q6PHR2 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.22■□□□□ 0.83
ULK3Q6PHR2 MIR6724-1-201ENST00000616420 92 ntBASIC20.22■□□□□ 0.83
ULK3Q6PHR2 MIR6724-2-201ENST00000616483 92 ntBASIC20.22■□□□□ 0.83
ULK3Q6PHR2 MIR6724-4-201ENST00000617390 92 ntBASIC20.22■□□□□ 0.83
ULK3Q6PHR2 MIR6724-3-201ENST00000622482 92 ntBASIC20.22■□□□□ 0.83
ULK3Q6PHR2 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ULK3Q6PHR2 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ULK3Q6PHR2 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ULK3Q6PHR2 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
ULK3Q6PHR2 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ULK3Q6PHR2 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.22■□□□□ 0.83
ULK3Q6PHR2 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ULK3Q6PHR2 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.21■□□□□ 0.83
ULK3Q6PHR2 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.21■□□□□ 0.83
ULK3Q6PHR2 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ULK3Q6PHR2 AC009086.3-201ENST00000623486 1008 ntBASIC20.21■□□□□ 0.83
ULK3Q6PHR2 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ULK3Q6PHR2 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.21■□□□□ 0.83
ULK3Q6PHR2 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
ULK3Q6PHR2 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ULK3Q6PHR2 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
ULK3Q6PHR2 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ULK3Q6PHR2 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ULK3Q6PHR2 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ULK3Q6PHR2 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ULK3Q6PHR2 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ULK3Q6PHR2 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.2■□□□□ 0.82
ULK3Q6PHR2 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ULK3Q6PHR2 AL035685.1-201ENST00000636663 812 ntBASIC20.2■□□□□ 0.82
ULK3Q6PHR2 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ULK3Q6PHR2 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.2■□□□□ 0.82
ULK3Q6PHR2 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ULK3Q6PHR2 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
ULK3Q6PHR2 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
ULK3Q6PHR2 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ULK3Q6PHR2 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
ULK3Q6PHR2 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ULK3Q6PHR2 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ULK3Q6PHR2 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ULK3Q6PHR2 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ULK3Q6PHR2 C17orf82-201ENST00000623772 1530 ntBASIC20.19■□□□□ 0.82
ULK3Q6PHR2 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ULK3Q6PHR2 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.19■□□□□ 0.82
ULK3Q6PHR2 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
ULK3Q6PHR2 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ULK3Q6PHR2 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ULK3Q6PHR2 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ULK3Q6PHR2 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ULK3Q6PHR2 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ULK3Q6PHR2 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
ULK3Q6PHR2 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.18■□□□□ 0.82
ULK3Q6PHR2 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
ULK3Q6PHR2 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.18■□□□□ 0.82
ULK3Q6PHR2 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ULK3Q6PHR2 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.18■□□□□ 0.82
ULK3Q6PHR2 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ULK3Q6PHR2 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
ULK3Q6PHR2 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
ULK3Q6PHR2 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ULK3Q6PHR2 AC127496.7-201ENST00000625110 1798 ntBASIC20.18■□□□□ 0.82
ULK3Q6PHR2 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
ULK3Q6PHR2 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ULK3Q6PHR2 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.17■□□□□ 0.82
ULK3Q6PHR2 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.17■□□□□ 0.82
ULK3Q6PHR2 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ULK3Q6PHR2 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.17■□□□□ 0.82
ULK3Q6PHR2 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
ULK3Q6PHR2 ECEL1P1-201ENST00000373592 1742 ntBASIC20.16■□□□□ 0.82
ULK3Q6PHR2 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ULK3Q6PHR2 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ULK3Q6PHR2 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ULK3Q6PHR2 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ULK3Q6PHR2 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
ULK3Q6PHR2 KRT16P3-201ENST00000439127 1283 ntBASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms