Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTL6Q6ICC9 FP325331.1-202ENST00000623531 1380 ntBASIC19.94■□□□□ 0.78
RTL6Q6ICC9 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTL6Q6ICC9 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.93■□□□□ 0.78
RTL6Q6ICC9 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
RTL6Q6ICC9 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.93■□□□□ 0.78
RTL6Q6ICC9 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTL6Q6ICC9 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTL6Q6ICC9 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
RTL6Q6ICC9 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTL6Q6ICC9 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTL6Q6ICC9 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTL6Q6ICC9 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTL6Q6ICC9 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.93■□□□□ 0.78
RTL6Q6ICC9 DUX4L4-201ENST00000566884 1269 ntBASIC19.93■□□□□ 0.78
RTL6Q6ICC9 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RTL6Q6ICC9 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
RTL6Q6ICC9 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RTL6Q6ICC9 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RTL6Q6ICC9 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.92■□□□□ 0.78
RTL6Q6ICC9 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RTL6Q6ICC9 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.92■□□□□ 0.78
RTL6Q6ICC9 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.92■□□□□ 0.78
RTL6Q6ICC9 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.92■□□□□ 0.78
RTL6Q6ICC9 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.92■□□□□ 0.78
RTL6Q6ICC9 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.92■□□□□ 0.78
RTL6Q6ICC9 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
RTL6Q6ICC9 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RTL6Q6ICC9 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
RTL6Q6ICC9 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
RTL6Q6ICC9 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RTL6Q6ICC9 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
RTL6Q6ICC9 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
RTL6Q6ICC9 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
RTL6Q6ICC9 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RTL6Q6ICC9 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
RTL6Q6ICC9 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
RTL6Q6ICC9 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RTL6Q6ICC9 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.91■□□□□ 0.78
RTL6Q6ICC9 AC010525.1-201ENST00000585559 441 ntBASIC19.91■□□□□ 0.78
RTL6Q6ICC9 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RTL6Q6ICC9 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
RTL6Q6ICC9 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RTL6Q6ICC9 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RTL6Q6ICC9 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.91■□□□□ 0.78
RTL6Q6ICC9 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RTL6Q6ICC9 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.91■□□□□ 0.78
RTL6Q6ICC9 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RTL6Q6ICC9 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
RTL6Q6ICC9 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RTL6Q6ICC9 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.91■□□□□ 0.78
RTL6Q6ICC9 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.9■□□□□ 0.78
RTL6Q6ICC9 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RTL6Q6ICC9 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RTL6Q6ICC9 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.9■□□□□ 0.78
RTL6Q6ICC9 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
RTL6Q6ICC9 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RTL6Q6ICC9 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RTL6Q6ICC9 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.9■□□□□ 0.78
RTL6Q6ICC9 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.9■□□□□ 0.78
RTL6Q6ICC9 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RTL6Q6ICC9 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.9■□□□□ 0.78
RTL6Q6ICC9 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
RTL6Q6ICC9 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RTL6Q6ICC9 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RTL6Q6ICC9 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
RTL6Q6ICC9 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RTL6Q6ICC9 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RTL6Q6ICC9 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RTL6Q6ICC9 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
RTL6Q6ICC9 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.89■□□□□ 0.77
RTL6Q6ICC9 IGHV3-19-201ENST00000521488 291 ntBASIC19.89■□□□□ 0.77
RTL6Q6ICC9 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.89■□□□□ 0.77
RTL6Q6ICC9 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
RTL6Q6ICC9 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
RTL6Q6ICC9 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RTL6Q6ICC9 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RTL6Q6ICC9 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
RTL6Q6ICC9 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RTL6Q6ICC9 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.88■□□□□ 0.77
RTL6Q6ICC9 AC144652.1-201ENST00000609974 1624 ntBASIC19.88■□□□□ 0.77
RTL6Q6ICC9 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RTL6Q6ICC9 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.88■□□□□ 0.77
RTL6Q6ICC9 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RTL6Q6ICC9 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RTL6Q6ICC9 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RTL6Q6ICC9 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
RTL6Q6ICC9 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RTL6Q6ICC9 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RTL6Q6ICC9 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RTL6Q6ICC9 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RTL6Q6ICC9 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RTL6Q6ICC9 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RTL6Q6ICC9 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RTL6Q6ICC9 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
RTL6Q6ICC9 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RTL6Q6ICC9 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.87■□□□□ 0.77
RTL6Q6ICC9 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RTL6Q6ICC9 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.87■□□□□ 0.77
RTL6Q6ICC9 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms