Protein–RNA interactions for Protein: Q63HN8

RNF213, E3 ubiquitin-protein ligase RNF213, humanhuman

Predictions only

Length 5,207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213Q63HN8 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
RNF213Q63HN8 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC12.09□□□□□ -0.47
RNF213Q63HN8 RN7SL850P-201ENST00000579959 291 ntBASIC12.09□□□□□ -0.47
RNF213Q63HN8 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
RNF213Q63HN8 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
RNF213Q63HN8 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC12.09□□□□□ -0.47
RNF213Q63HN8 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
RNF213Q63HN8 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RNF213Q63HN8 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RNF213Q63HN8 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC12.09□□□□□ -0.47
RNF213Q63HN8 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
RNF213Q63HN8 MIR718-201ENST00000390190 70 ntBASIC12.08□□□□□ -0.48
RNF213Q63HN8 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
RNF213Q63HN8 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC12.08□□□□□ -0.48
RNF213Q63HN8 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC12.08□□□□□ -0.48
RNF213Q63HN8 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC12.08□□□□□ -0.48
RNF213Q63HN8 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
RNF213Q63HN8 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC12.08□□□□□ -0.48
RNF213Q63HN8 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
RNF213Q63HN8 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC12.08□□□□□ -0.48
RNF213Q63HN8 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RNF213Q63HN8 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC12.08□□□□□ -0.48
RNF213Q63HN8 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC12.08□□□□□ -0.48
RNF213Q63HN8 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RNF213Q63HN8 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RNF213Q63HN8 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
RNF213Q63HN8 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC12.08□□□□□ -0.48
RNF213Q63HN8 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RNF213Q63HN8 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
RNF213Q63HN8 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
RNF213Q63HN8 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC12.07□□□□□ -0.48
RNF213Q63HN8 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC12.07□□□□□ -0.48
RNF213Q63HN8 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
RNF213Q63HN8 UBE2SP1-201ENST00000450587 669 ntBASIC12.07□□□□□ -0.48
RNF213Q63HN8 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
RNF213Q63HN8 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RNF213Q63HN8 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
RNF213Q63HN8 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RNF213Q63HN8 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
RNF213Q63HN8 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RNF213Q63HN8 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC12.07□□□□□ -0.48
RNF213Q63HN8 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC12.07□□□□□ -0.48
RNF213Q63HN8 BRWD1-AS2-201ENST00000603064 1028 ntBASIC12.07□□□□□ -0.48
RNF213Q63HN8 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC12.07□□□□□ -0.48
RNF213Q63HN8 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
RNF213Q63HN8 CPT2-209ENST00000636935 803 ntTSL 5 BASIC12.07□□□□□ -0.48
RNF213Q63HN8 LINC01003-201ENST00000564834 1764 ntBASIC12.07□□□□□ -0.48
RNF213Q63HN8 PROC-203ENST00000409048 1586 ntTSL 5 BASIC12.07□□□□□ -0.48
RNF213Q63HN8 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RNF213Q63HN8 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RNF213Q63HN8 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RNF213Q63HN8 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
RNF213Q63HN8 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
RNF213Q63HN8 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RNF213Q63HN8 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
RNF213Q63HN8 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC12.06□□□□□ -0.48
RNF213Q63HN8 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC12.06□□□□□ -0.48
RNF213Q63HN8 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC12.06□□□□□ -0.48
RNF213Q63HN8 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC12.06□□□□□ -0.48
RNF213Q63HN8 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
RNF213Q63HN8 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RNF213Q63HN8 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
RNF213Q63HN8 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC12.06□□□□□ -0.48
RNF213Q63HN8 PPOX-219ENST00000544598 813 ntTSL 2 BASIC12.06□□□□□ -0.48
RNF213Q63HN8 PHB2-213ENST00000546111 858 ntTSL 2 BASIC12.06□□□□□ -0.48
RNF213Q63HN8 AC010525.1-201ENST00000585559 441 ntBASIC12.06□□□□□ -0.48
RNF213Q63HN8 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
RNF213Q63HN8 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
RNF213Q63HN8 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
RNF213Q63HN8 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RNF213Q63HN8 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC12.06□□□□□ -0.48
RNF213Q63HN8 TMPOP1-202ENST00000424642 1267 ntBASIC12.06□□□□□ -0.48
RNF213Q63HN8 TPM1-226ENST00000560959 925 ntTSL 2 BASIC12.06□□□□□ -0.48
RNF213Q63HN8 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
RNF213Q63HN8 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
RNF213Q63HN8 DRD5P2-201ENST00000421395 2012 ntBASIC12.05□□□□□ -0.48
RNF213Q63HN8 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC12.05□□□□□ -0.48
RNF213Q63HN8 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC12.05□□□□□ -0.48
RNF213Q63HN8 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RNF213Q63HN8 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RNF213Q63HN8 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
RNF213Q63HN8 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC12.05□□□□□ -0.48
RNF213Q63HN8 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC12.05□□□□□ -0.48
RNF213Q63HN8 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RNF213Q63HN8 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
RNF213Q63HN8 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC12.05□□□□□ -0.48
RNF213Q63HN8 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RNF213Q63HN8 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
RNF213Q63HN8 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC12.05□□□□□ -0.48
RNF213Q63HN8 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
RNF213Q63HN8 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RNF213Q63HN8 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC12.05□□□□□ -0.48
RNF213Q63HN8 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RNF213Q63HN8 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RNF213Q63HN8 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
RNF213Q63HN8 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC12.04□□□□□ -0.48
RNF213Q63HN8 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
RNF213Q63HN8 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC12.04□□□□□ -0.48
RNF213Q63HN8 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC12.04□□□□□ -0.48
RNF213Q63HN8 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 12 ms