Protein–RNA interactions for Protein: Q5VT28

FAM27B, Protein FAM27A/B/C, humanhuman

Predictions only

Length 67 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM27BQ5VT28 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
FAM27BQ5VT28 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
FAM27BQ5VT28 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FAM27BQ5VT28 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FAM27BQ5VT28 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
FAM27BQ5VT28 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
FAM27BQ5VT28 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.42■□□□□ 0.7
FAM27BQ5VT28 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
FAM27BQ5VT28 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
FAM27BQ5VT28 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FAM27BQ5VT28 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
FAM27BQ5VT28 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC19.41■□□□□ 0.7
FAM27BQ5VT28 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.41■□□□□ 0.7
FAM27BQ5VT28 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
FAM27BQ5VT28 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.41■□□□□ 0.7
FAM27BQ5VT28 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
FAM27BQ5VT28 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FAM27BQ5VT28 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.41■□□□□ 0.7
FAM27BQ5VT28 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
FAM27BQ5VT28 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.41■□□□□ 0.7
FAM27BQ5VT28 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.41■□□□□ 0.7
FAM27BQ5VT28 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
FAM27BQ5VT28 MIR4466-201ENST00000606121 54 ntBASIC19.41■□□□□ 0.7
FAM27BQ5VT28 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
FAM27BQ5VT28 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.41■□□□□ 0.7
FAM27BQ5VT28 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
FAM27BQ5VT28 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
FAM27BQ5VT28 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FAM27BQ5VT28 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.41■□□□□ 0.7
FAM27BQ5VT28 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FAM27BQ5VT28 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FAM27BQ5VT28 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
FAM27BQ5VT28 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.4■□□□□ 0.7
FAM27BQ5VT28 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FAM27BQ5VT28 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
FAM27BQ5VT28 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
FAM27BQ5VT28 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FAM27BQ5VT28 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
FAM27BQ5VT28 AC131281.2-201ENST00000520478 145 ntBASIC19.4■□□□□ 0.7
FAM27BQ5VT28 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.4■□□□□ 0.7
FAM27BQ5VT28 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.4■□□□□ 0.7
FAM27BQ5VT28 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
FAM27BQ5VT28 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
FAM27BQ5VT28 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
FAM27BQ5VT28 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
FAM27BQ5VT28 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.4■□□□□ 0.7
FAM27BQ5VT28 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
FAM27BQ5VT28 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
FAM27BQ5VT28 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
FAM27BQ5VT28 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
FAM27BQ5VT28 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
FAM27BQ5VT28 AC006455.2-201ENST00000429931 906 ntBASIC19.39■□□□□ 0.69
FAM27BQ5VT28 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.39■□□□□ 0.69
FAM27BQ5VT28 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.39■□□□□ 0.69
FAM27BQ5VT28 AC004687.1-201ENST00000579003 1625 ntBASIC19.39■□□□□ 0.69
FAM27BQ5VT28 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
FAM27BQ5VT28 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
FAM27BQ5VT28 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FAM27BQ5VT28 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
FAM27BQ5VT28 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.39■□□□□ 0.69
FAM27BQ5VT28 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
FAM27BQ5VT28 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
FAM27BQ5VT28 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
FAM27BQ5VT28 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
FAM27BQ5VT28 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
FAM27BQ5VT28 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
FAM27BQ5VT28 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.38■□□□□ 0.69
FAM27BQ5VT28 AC233723.2-201ENST00000623798 2106 ntBASIC19.37■□□□□ 0.69
FAM27BQ5VT28 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
FAM27BQ5VT28 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.37■□□□□ 0.69
FAM27BQ5VT28 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.37■□□□□ 0.69
FAM27BQ5VT28 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.37■□□□□ 0.69
FAM27BQ5VT28 pRNA.6-201ENST00000610482 90 ntBASIC19.37■□□□□ 0.69
FAM27BQ5VT28 pRNA.5-201ENST00000612139 90 ntBASIC19.37■□□□□ 0.69
FAM27BQ5VT28 pRNA.11-201ENST00000618423 90 ntBASIC19.37■□□□□ 0.69
FAM27BQ5VT28 pRNA.13-201ENST00000619112 90 ntBASIC19.37■□□□□ 0.69
FAM27BQ5VT28 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
FAM27BQ5VT28 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.37■□□□□ 0.69
FAM27BQ5VT28 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.37■□□□□ 0.69
FAM27BQ5VT28 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
FAM27BQ5VT28 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
FAM27BQ5VT28 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
FAM27BQ5VT28 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
FAM27BQ5VT28 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
FAM27BQ5VT28 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
FAM27BQ5VT28 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
FAM27BQ5VT28 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
FAM27BQ5VT28 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.36■□□□□ 0.69
FAM27BQ5VT28 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
FAM27BQ5VT28 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
FAM27BQ5VT28 DUX4L19-201ENST00000557448 1267 ntBASIC19.36■□□□□ 0.69
FAM27BQ5VT28 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
FAM27BQ5VT28 AC131212.1-201ENST00000613771 668 ntBASIC19.36■□□□□ 0.69
FAM27BQ5VT28 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
FAM27BQ5VT28 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
FAM27BQ5VT28 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
FAM27BQ5VT28 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.36■□□□□ 0.69
FAM27BQ5VT28 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
FAM27BQ5VT28 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
FAM27BQ5VT28 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms