Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.13■□□□□ 0.65
ATPAF1Q5TC12 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ATPAF1Q5TC12 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
ATPAF1Q5TC12 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATPAF1Q5TC12 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATPAF1Q5TC12 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATPAF1Q5TC12 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.12■□□□□ 0.65
ATPAF1Q5TC12 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.12■□□□□ 0.65
ATPAF1Q5TC12 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATPAF1Q5TC12 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATPAF1Q5TC12 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.12■□□□□ 0.65
ATPAF1Q5TC12 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATPAF1Q5TC12 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ATPAF1Q5TC12 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.12■□□□□ 0.65
ATPAF1Q5TC12 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
ATPAF1Q5TC12 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.12■□□□□ 0.65
ATPAF1Q5TC12 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
ATPAF1Q5TC12 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.12■□□□□ 0.65
ATPAF1Q5TC12 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.11■□□□□ 0.65
ATPAF1Q5TC12 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ATPAF1Q5TC12 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
ATPAF1Q5TC12 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
ATPAF1Q5TC12 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
ATPAF1Q5TC12 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.11■□□□□ 0.65
ATPAF1Q5TC12 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATPAF1Q5TC12 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.11■□□□□ 0.65
ATPAF1Q5TC12 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.11■□□□□ 0.65
ATPAF1Q5TC12 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ATPAF1Q5TC12 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATPAF1Q5TC12 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATPAF1Q5TC12 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ATPAF1Q5TC12 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
ATPAF1Q5TC12 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATPAF1Q5TC12 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.1■□□□□ 0.65
ATPAF1Q5TC12 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATPAF1Q5TC12 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ATPAF1Q5TC12 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.1■□□□□ 0.65
ATPAF1Q5TC12 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATPAF1Q5TC12 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATPAF1Q5TC12 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
ATPAF1Q5TC12 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
ATPAF1Q5TC12 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
ATPAF1Q5TC12 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATPAF1Q5TC12 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.09■□□□□ 0.65
ATPAF1Q5TC12 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATPAF1Q5TC12 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.09■□□□□ 0.65
ATPAF1Q5TC12 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATPAF1Q5TC12 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATPAF1Q5TC12 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATPAF1Q5TC12 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATPAF1Q5TC12 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.09■□□□□ 0.65
ATPAF1Q5TC12 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.09■□□□□ 0.65
ATPAF1Q5TC12 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.09■□□□□ 0.65
ATPAF1Q5TC12 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.09■□□□□ 0.65
ATPAF1Q5TC12 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
ATPAF1Q5TC12 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATPAF1Q5TC12 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATPAF1Q5TC12 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATPAF1Q5TC12 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATPAF1Q5TC12 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
ATPAF1Q5TC12 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.08■□□□□ 0.65
ATPAF1Q5TC12 UNC93B8-201ENST00000511903 705 ntBASIC19.08■□□□□ 0.64
ATPAF1Q5TC12 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.08■□□□□ 0.64
ATPAF1Q5TC12 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ATPAF1Q5TC12 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.08■□□□□ 0.64
ATPAF1Q5TC12 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.08■□□□□ 0.64
ATPAF1Q5TC12 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ATPAF1Q5TC12 ALDH1A3-203ENST00000557963 1670 ntBASIC19.08■□□□□ 0.64
ATPAF1Q5TC12 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATPAF1Q5TC12 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ATPAF1Q5TC12 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATPAF1Q5TC12 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATPAF1Q5TC12 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATPAF1Q5TC12 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATPAF1Q5TC12 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATPAF1Q5TC12 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.07■□□□□ 0.64
ATPAF1Q5TC12 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.07■□□□□ 0.64
ATPAF1Q5TC12 MTDHP2-201ENST00000601468 714 ntBASIC19.07■□□□□ 0.64
ATPAF1Q5TC12 AC010997.5-201ENST00000609182 354 ntBASIC19.07■□□□□ 0.64
ATPAF1Q5TC12 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.07■□□□□ 0.64
ATPAF1Q5TC12 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.07■□□□□ 0.64
ATPAF1Q5TC12 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.07■□□□□ 0.64
ATPAF1Q5TC12 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATPAF1Q5TC12 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ATPAF1Q5TC12 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.06■□□□□ 0.64
ATPAF1Q5TC12 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.06■□□□□ 0.64
ATPAF1Q5TC12 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ATPAF1Q5TC12 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC19.06■□□□□ 0.64
ATPAF1Q5TC12 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ATPAF1Q5TC12 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ATPAF1Q5TC12 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ATPAF1Q5TC12 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.06■□□□□ 0.64
ATPAF1Q5TC12 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.06■□□□□ 0.64
ATPAF1Q5TC12 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
ATPAF1Q5TC12 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.06■□□□□ 0.64
ATPAF1Q5TC12 AC242852.2-201ENST00000615738 1807 ntBASIC19.06■□□□□ 0.64
ATPAF1Q5TC12 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ATPAF1Q5TC12 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
ATPAF1Q5TC12 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
ATPAF1Q5TC12 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms