Protein–RNA interactions for Protein: Q12242

RUP1, UBA domain-containing protein RUP1, yeastyeast

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RUP1Q12242 TTI2YJR136C 1266 nt4.25□□□□□ -1.73
RUP1Q12242 REX3YLR107W 1215 nt4.25□□□□□ -1.73
RUP1Q12242 ECM23YPL021W 564 nt4.25□□□□□ -1.73
RUP1Q12242 CMR3YPR013C 954 nt4.25□□□□□ -1.73
RUP1Q12242 YCF1YDR135C 4548 nt4.25□□□□□ -1.73
RUP1Q12242 ALG9YNL219C 1668 nt4.25□□□□□ -1.73
RUP1Q12242 ADY3YDL239C 2373 nt4.25□□□□□ -1.73
RUP1Q12242 VID28YIL017C 2766 nt4.25□□□□□ -1.73
RUP1Q12242 RTC1YOL138C 4026 nt4.24□□□□□ -1.73
RUP1Q12242 IME4YGL192W 1803 nt4.24□□□□□ -1.73
RUP1Q12242 HSP42YDR171W 1128 nt4.24□□□□□ -1.73
RUP1Q12242 YER145C-AYER145C-A 438 nt4.24□□□□□ -1.73
RUP1Q12242 RPS1BYML063W 768 nt4.24□□□□□ -1.73
RUP1Q12242 YMR085WYMR085W 1299 nt4.24□□□□□ -1.73
RUP1Q12242 SPS19YNL202W 879 nt4.24□□□□□ -1.73
RUP1Q12242 URE2YNL229C 1065 nt4.24□□□□□ -1.73
RUP1Q12242 RCL1YOL010W 1104 nt4.24□□□□□ -1.73
RUP1Q12242 RGS2YOR107W 930 nt4.24□□□□□ -1.73
RUP1Q12242 MDL1YLR188W 2088 nt4.24□□□□□ -1.73
RUP1Q12242 BBC1YJL020C 3474 nt4.24□□□□□ -1.73
RUP1Q12242 MDM34YGL219C 1380 nt4.24□□□□□ -1.73
RUP1Q12242 VMA1YDL185W 3216 nt4.23□□□□□ -1.73
RUP1Q12242 ORC6YHR118C 1308 nt4.23□□□□□ -1.73
RUP1Q12242 YHP1YDR451C 1062 nt4.23□□□□□ -1.73
RUP1Q12242 RFC2YJR068W 1062 nt4.23□□□□□ -1.73
RUP1Q12242 PWR1PWR1 941 nt4.23□□□□□ -1.73
RUP1Q12242 TPA1YER049W 1935 nt4.23□□□□□ -1.73
RUP1Q12242 PTA1YAL043C 2358 nt4.22□□□□□ -1.73
RUP1Q12242 POL12YBL035C 2118 nt4.22□□□□□ -1.73
RUP1Q12242 TFA1YKL028W 1449 nt4.22□□□□□ -1.73
RUP1Q12242 TDA6YPR157W 1404 nt4.22□□□□□ -1.73
RUP1Q12242 RPL24AYGL031C 468 nt4.22□□□□□ -1.73
RUP1Q12242 SNL1YIL016W 480 nt4.22□□□□□ -1.73
RUP1Q12242 YNR061CYNR061C 660 nt4.22□□□□□ -1.73
RUP1Q12242 ICY2YPL250C 411 nt4.22□□□□□ -1.73
RUP1Q12242 MET16YPR167C 786 nt4.22□□□□□ -1.73
RUP1Q12242 YBR134WYBR134W 402 nt4.22□□□□□ -1.73
RUP1Q12242 CDC14YFR028C 1656 nt4.22□□□□□ -1.73
RUP1Q12242 TYW1YPL207W 2433 nt4.22□□□□□ -1.73
RUP1Q12242 SUL2YLR092W 2682 nt4.21□□□□□ -1.73
RUP1Q12242 RPS11AYDR025W 471 nt4.21□□□□□ -1.74
RUP1Q12242 YGL193CYGL193C 312 nt4.21□□□□□ -1.74
RUP1Q12242 CPR3YML078W 549 nt4.21□□□□□ -1.74
RUP1Q12242 VPS28YPL065W 729 nt4.21□□□□□ -1.74
RUP1Q12242 ENT1YDL161W 1365 nt4.21□□□□□ -1.74
RUP1Q12242 NUG1YER006W 1563 nt4.21□□□□□ -1.74
RUP1Q12242 YPK3YBR028C 1578 nt4.21□□□□□ -1.74
RUP1Q12242 ADP1YCR011C 3150 nt4.21□□□□□ -1.74
RUP1Q12242 UTP6YDR449C 1323 nt4.21□□□□□ -1.74
RUP1Q12242 KIN28YDL108W 921 nt4.2□□□□□ -1.74
RUP1Q12242 tQ(UUG)CtQ(UUG)C 72 nt4.2□□□□□ -1.74
RUP1Q12242 tQ(UUG)D1tQ(UUG)D1 72 nt4.2□□□□□ -1.74
RUP1Q12242 tQ(UUG)D2tQ(UUG)D2 72 nt4.2□□□□□ -1.74
RUP1Q12242 tQ(UUG)D3tQ(UUG)D3 72 nt4.2□□□□□ -1.74
RUP1Q12242 tQ(UUG)E1tQ(UUG)E1 72 nt4.2□□□□□ -1.74
RUP1Q12242 YGR269WYGR269W 327 nt4.2□□□□□ -1.74
RUP1Q12242 tQ(UUG)HtQ(UUG)H 72 nt4.2□□□□□ -1.74
RUP1Q12242 tQ(UUG)LtQ(UUG)L 72 nt4.2□□□□□ -1.74
RUP1Q12242 RPL8AYHL033C 771 nt4.2□□□□□ -1.74
RUP1Q12242 YLR225CYLR225C 1224 nt4.2□□□□□ -1.74
RUP1Q12242 IMP2YMR035W 534 nt4.2□□□□□ -1.74
RUP1Q12242 MPD1YOR288C 957 nt4.2□□□□□ -1.74
RUP1Q12242 YIL001WYIL001W 1542 nt4.2□□□□□ -1.74
RUP1Q12242 SKM1YOL113W 1968 nt4.2□□□□□ -1.74
RUP1Q12242 SSA2YLL024C 1920 nt4.19□□□□□ -1.74
RUP1Q12242 CEG1YGL130W 1380 nt4.19□□□□□ -1.74
RUP1Q12242 SSH4YKL124W 1740 nt4.19□□□□□ -1.74
RUP1Q12242 RMD5YDR255C 1266 nt4.19□□□□□ -1.74
RUP1Q12242 MRP13YGR084C 1020 nt4.19□□□□□ -1.74
RUP1Q12242 RFU1YLR073C 603 nt4.19□□□□□ -1.74
RUP1Q12242 SHE1YBL031W 1017 nt4.19□□□□□ -1.74
RUP1Q12242 SUI1YNL244C 327 nt4.19□□□□□ -1.74
RUP1Q12242 NDJ1YOL104C 1059 nt4.19□□□□□ -1.74
RUP1Q12242 YPR071WYPR071W 636 nt4.19□□□□□ -1.74
RUP1Q12242 STP22YCL008C 1158 nt4.19□□□□□ -1.74
RUP1Q12242 TDA11YHR159W 1515 nt4.19□□□□□ -1.74
RUP1Q12242 LAS1YKR063C 1509 nt4.19□□□□□ -1.74
RUP1Q12242 NGL3YML118W 1518 nt4.19□□□□□ -1.74
RUP1Q12242 PMT4YJR143C 2289 nt4.19□□□□□ -1.74
RUP1Q12242 DBP3YGL078C 1572 nt4.19□□□□□ -1.74
RUP1Q12242 FBP26YJL155C 1359 nt4.18□□□□□ -1.74
RUP1Q12242 COQ4YDR204W 1008 nt4.18□□□□□ -1.74
RUP1Q12242 RPL14AYKL006W 417 nt4.18□□□□□ -1.74
RUP1Q12242 ACP1YKL192C 378 nt4.18□□□□□ -1.74
RUP1Q12242 JLP1YLL057C 1239 nt4.18□□□□□ -1.74
RUP1Q12242 YOL024WYOL024W 519 nt4.18□□□□□ -1.74
RUP1Q12242 HRT1YOL133W 366 nt4.18□□□□□ -1.74
RUP1Q12242 SET6YPL165C 1122 nt4.18□□□□□ -1.74
RUP1Q12242 PRP9YDL030W 1593 nt4.18□□□□□ -1.74
RUP1Q12242 ABD1YBR236C 1311 nt4.18□□□□□ -1.74
RUP1Q12242 DPH6YLR143W 2058 nt4.17□□□□□ -1.74
RUP1Q12242 OCA4YCR095C 1089 nt4.17□□□□□ -1.74
RUP1Q12242 BUD30YDL151C 582 nt4.17□□□□□ -1.74
RUP1Q12242 RPB7YDR404C 516 nt4.17□□□□□ -1.74
RUP1Q12242 YHB1YGR234W 1200 nt4.17□□□□□ -1.74
RUP1Q12242 YLR364C-AYLR364C-A 123 nt4.17□□□□□ -1.74
RUP1Q12242 SHE3YBR130C 1278 nt4.17□□□□□ -1.74
RUP1Q12242 NPL4YBR170C 1743 nt4.17□□□□□ -1.74
RUP1Q12242 OAF1YAL051W 3144 nt4.17□□□□□ -1.74
RUP1Q12242 SRO7YPR032W 3102 nt4.17□□□□□ -1.74
Retrieved 100 of 7,029 protein–RNA pairs in 12.3 ms