Protein–RNA interactions for Protein: Q07837

SLC3A1, Neutral and basic amino acid transport protein rBAT, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A1Q07837 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.82■□□□□ 0.76
SLC3A1Q07837 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.82■□□□□ 0.76
SLC3A1Q07837 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SLC3A1Q07837 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.82■□□□□ 0.76
SLC3A1Q07837 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SLC3A1Q07837 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.82■□□□□ 0.76
SLC3A1Q07837 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC3A1Q07837 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC3A1Q07837 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.81■□□□□ 0.76
SLC3A1Q07837 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.81■□□□□ 0.76
SLC3A1Q07837 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC3A1Q07837 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SLC3A1Q07837 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC3A1Q07837 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SLC3A1Q07837 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC3A1Q07837 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
SLC3A1Q07837 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC3A1Q07837 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SLC3A1Q07837 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
SLC3A1Q07837 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
SLC3A1Q07837 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC3A1Q07837 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SLC3A1Q07837 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.81■□□□□ 0.76
SLC3A1Q07837 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SLC3A1Q07837 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.81■□□□□ 0.76
SLC3A1Q07837 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SLC3A1Q07837 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC3A1Q07837 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC3A1Q07837 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC3A1Q07837 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SLC3A1Q07837 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC3A1Q07837 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC3A1Q07837 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.8■□□□□ 0.76
SLC3A1Q07837 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
SLC3A1Q07837 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SLC3A1Q07837 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC3A1Q07837 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC3A1Q07837 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.79■□□□□ 0.76
SLC3A1Q07837 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC3A1Q07837 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SLC3A1Q07837 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
SLC3A1Q07837 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.79■□□□□ 0.76
SLC3A1Q07837 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SLC3A1Q07837 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC3A1Q07837 AC079630.1-202ENST00000618127 1840 ntBASIC19.79■□□□□ 0.76
SLC3A1Q07837 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SLC3A1Q07837 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC3A1Q07837 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC3A1Q07837 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC3A1Q07837 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.79■□□□□ 0.76
SLC3A1Q07837 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.79■□□□□ 0.76
SLC3A1Q07837 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
SLC3A1Q07837 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC3A1Q07837 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.79■□□□□ 0.76
SLC3A1Q07837 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SLC3A1Q07837 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC3A1Q07837 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC3A1Q07837 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.78■□□□□ 0.76
SLC3A1Q07837 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SLC3A1Q07837 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC3A1Q07837 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.78■□□□□ 0.76
SLC3A1Q07837 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC3A1Q07837 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.78■□□□□ 0.76
SLC3A1Q07837 AC137630.3-201ENST00000607245 391 ntBASIC19.78■□□□□ 0.76
SLC3A1Q07837 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.78■□□□□ 0.76
SLC3A1Q07837 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
SLC3A1Q07837 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.78■□□□□ 0.76
SLC3A1Q07837 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.78■□□□□ 0.76
SLC3A1Q07837 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
SLC3A1Q07837 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SLC3A1Q07837 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.77■□□□□ 0.76
SLC3A1Q07837 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SLC3A1Q07837 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC3A1Q07837 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
SLC3A1Q07837 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC3A1Q07837 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SLC3A1Q07837 AC239859.2-201ENST00000444165 318 ntBASIC19.77■□□□□ 0.76
SLC3A1Q07837 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.77■□□□□ 0.76
SLC3A1Q07837 MIR4281-201ENST00000580852 62 ntBASIC19.77■□□□□ 0.76
SLC3A1Q07837 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.77■□□□□ 0.76
SLC3A1Q07837 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SLC3A1Q07837 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
SLC3A1Q07837 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC3A1Q07837 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SLC3A1Q07837 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC3A1Q07837 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SLC3A1Q07837 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC3A1Q07837 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.76■□□□□ 0.75
SLC3A1Q07837 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC3A1Q07837 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC3A1Q07837 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC3A1Q07837 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC3A1Q07837 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
SLC3A1Q07837 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC3A1Q07837 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC3A1Q07837 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC3A1Q07837 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.76■□□□□ 0.75
SLC3A1Q07837 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.76■□□□□ 0.75
SLC3A1Q07837 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC3A1Q07837 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms