Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
CNTNAP1P78357 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
CNTNAP1P78357 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
CNTNAP1P78357 TMEM202-AS1-202ENST00000565181 2325 ntBASIC26.72■■□□□ 1.87
CNTNAP1P78357 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
CNTNAP1P78357 MPST-204ENST00000404393 1329 ntTSL 5 BASIC26.71■■□□□ 1.87
CNTNAP1P78357 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
CNTNAP1P78357 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC26.71■■□□□ 1.87
CNTNAP1P78357 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC26.71■■□□□ 1.87
CNTNAP1P78357 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
CNTNAP1P78357 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
CNTNAP1P78357 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
CNTNAP1P78357 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC26.71■■□□□ 1.87
CNTNAP1P78357 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC26.71■■□□□ 1.87
CNTNAP1P78357 AC008687.6-201ENST00000596318 630 ntBASIC26.71■■□□□ 1.87
CNTNAP1P78357 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC26.7■■□□□ 1.87
CNTNAP1P78357 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC26.7■■□□□ 1.87
CNTNAP1P78357 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC26.7■■□□□ 1.86
CNTNAP1P78357 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
CNTNAP1P78357 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC26.7■■□□□ 1.86
CNTNAP1P78357 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
CNTNAP1P78357 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
CNTNAP1P78357 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
CNTNAP1P78357 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
CNTNAP1P78357 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC26.7■■□□□ 1.86
CNTNAP1P78357 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC26.69■■□□□ 1.86
CNTNAP1P78357 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC26.69■■□□□ 1.86
CNTNAP1P78357 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
CNTNAP1P78357 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
CNTNAP1P78357 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC26.69■■□□□ 1.86
CNTNAP1P78357 AP003733.4-201ENST00000623785 1697 ntBASIC26.69■■□□□ 1.86
CNTNAP1P78357 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC26.69■■□□□ 1.86
CNTNAP1P78357 FAM201B-201ENST00000458407 597 ntBASIC26.69■■□□□ 1.86
CNTNAP1P78357 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
CNTNAP1P78357 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
CNTNAP1P78357 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC26.68■■□□□ 1.86
CNTNAP1P78357 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
CNTNAP1P78357 LHPP-203ENST00000392757 840 ntTSL 3 BASIC26.68■■□□□ 1.86
CNTNAP1P78357 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC26.68■■□□□ 1.86
CNTNAP1P78357 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CNTNAP1P78357 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CNTNAP1P78357 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC26.67■■□□□ 1.86
CNTNAP1P78357 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CNTNAP1P78357 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC26.67■■□□□ 1.86
CNTNAP1P78357 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CNTNAP1P78357 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
CNTNAP1P78357 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CNTNAP1P78357 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC26.67■■□□□ 1.86
CNTNAP1P78357 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
CNTNAP1P78357 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
CNTNAP1P78357 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC26.66■■□□□ 1.86
CNTNAP1P78357 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC26.66■■□□□ 1.86
CNTNAP1P78357 OR2I1P-207ENST00000453522 948 ntBASIC26.66■■□□□ 1.86
CNTNAP1P78357 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC26.66■■□□□ 1.86
CNTNAP1P78357 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC26.66■■□□□ 1.86
CNTNAP1P78357 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC26.66■■□□□ 1.86
CNTNAP1P78357 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC26.66■■□□□ 1.86
CNTNAP1P78357 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC26.65■■□□□ 1.86
CNTNAP1P78357 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CNTNAP1P78357 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC26.65■■□□□ 1.86
CNTNAP1P78357 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC26.65■■□□□ 1.86
CNTNAP1P78357 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC26.65■■□□□ 1.86
CNTNAP1P78357 KLF13-207ENST00000560473 489 ntTSL 3 BASIC26.65■■□□□ 1.86
CNTNAP1P78357 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC26.65■■□□□ 1.86
CNTNAP1P78357 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
CNTNAP1P78357 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC26.64■■□□□ 1.86
CNTNAP1P78357 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
CNTNAP1P78357 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC26.64■■□□□ 1.86
CNTNAP1P78357 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
CNTNAP1P78357 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC26.64■■□□□ 1.86
CNTNAP1P78357 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
CNTNAP1P78357 SHD-204ENST00000599689 1729 ntTSL 5 BASIC26.64■■□□□ 1.86
CNTNAP1P78357 EI24-213ENST00000618552 1747 ntTSL 5 BASIC26.64■■□□□ 1.86
CNTNAP1P78357 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC26.64■■□□□ 1.85
CNTNAP1P78357 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC26.64■■□□□ 1.85
CNTNAP1P78357 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC26.64■■□□□ 1.85
CNTNAP1P78357 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC26.63■■□□□ 1.85
CNTNAP1P78357 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC26.63■■□□□ 1.85
CNTNAP1P78357 DUX4L4-201ENST00000566884 1269 ntBASIC26.63■■□□□ 1.85
CNTNAP1P78357 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC26.63■■□□□ 1.85
CNTNAP1P78357 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
CNTNAP1P78357 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC26.63■■□□□ 1.85
CNTNAP1P78357 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC26.63■■□□□ 1.85
CNTNAP1P78357 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
CNTNAP1P78357 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC26.63■■□□□ 1.85
CNTNAP1P78357 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
CNTNAP1P78357 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC26.62■■□□□ 1.85
CNTNAP1P78357 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC26.62■■□□□ 1.85
CNTNAP1P78357 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC26.62■■□□□ 1.85
CNTNAP1P78357 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC26.62■■□□□ 1.85
CNTNAP1P78357 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC26.62■■□□□ 1.85
CNTNAP1P78357 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CNTNAP1P78357 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
CNTNAP1P78357 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC26.62■■□□□ 1.85
CNTNAP1P78357 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CNTNAP1P78357 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC26.62■■□□□ 1.85
CNTNAP1P78357 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CNTNAP1P78357 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC26.61■■□□□ 1.85
CNTNAP1P78357 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC26.61■■□□□ 1.85
CNTNAP1P78357 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC26.61■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms