Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VBP1P61758 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
VBP1P61758 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
VBP1P61758 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.86■□□□□ 0.77
VBP1P61758 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
VBP1P61758 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VBP1P61758 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VBP1P61758 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.86■□□□□ 0.77
VBP1P61758 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.86■□□□□ 0.77
VBP1P61758 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
VBP1P61758 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
VBP1P61758 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
VBP1P61758 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
VBP1P61758 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.85■□□□□ 0.77
VBP1P61758 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
VBP1P61758 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
VBP1P61758 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
VBP1P61758 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
VBP1P61758 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
VBP1P61758 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
VBP1P61758 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
VBP1P61758 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
VBP1P61758 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC19.85■□□□□ 0.77
VBP1P61758 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
VBP1P61758 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
VBP1P61758 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VBP1P61758 AL157384.1-201ENST00000445995 2473 ntBASIC19.84■□□□□ 0.77
VBP1P61758 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.84■□□□□ 0.77
VBP1P61758 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
VBP1P61758 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
VBP1P61758 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VBP1P61758 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
VBP1P61758 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.84■□□□□ 0.77
VBP1P61758 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VBP1P61758 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.84■□□□□ 0.77
VBP1P61758 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
VBP1P61758 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
VBP1P61758 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
VBP1P61758 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
VBP1P61758 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
VBP1P61758 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
VBP1P61758 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
VBP1P61758 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
VBP1P61758 DUX4L11-201ENST00000611504 1267 ntBASIC19.83■□□□□ 0.77
VBP1P61758 DUX4L12-201ENST00000614593 1267 ntBASIC19.83■□□□□ 0.77
VBP1P61758 DUX4L14-201ENST00000621227 1267 ntBASIC19.83■□□□□ 0.77
VBP1P61758 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
VBP1P61758 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.76
VBP1P61758 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
VBP1P61758 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.83■□□□□ 0.76
VBP1P61758 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
VBP1P61758 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
VBP1P61758 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VBP1P61758 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
VBP1P61758 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.82■□□□□ 0.76
VBP1P61758 HGH1-207ENST00000628266 258 ntTSL 5 BASIC19.82■□□□□ 0.76
VBP1P61758 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
VBP1P61758 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.82■□□□□ 0.76
VBP1P61758 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
VBP1P61758 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
VBP1P61758 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VBP1P61758 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VBP1P61758 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
VBP1P61758 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
VBP1P61758 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
VBP1P61758 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VBP1P61758 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VBP1P61758 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
VBP1P61758 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VBP1P61758 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC19.81■□□□□ 0.76
VBP1P61758 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC19.81■□□□□ 0.76
VBP1P61758 MOB2-207ENST00000614710 705 ntTSL 5 BASIC19.81■□□□□ 0.76
VBP1P61758 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.81■□□□□ 0.76
VBP1P61758 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VBP1P61758 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.81■□□□□ 0.76
VBP1P61758 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
VBP1P61758 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.81■□□□□ 0.76
VBP1P61758 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VBP1P61758 SMPD5-203ENST00000639008 1464 ntBASIC19.8■□□□□ 0.76
VBP1P61758 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VBP1P61758 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
VBP1P61758 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VBP1P61758 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
VBP1P61758 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
VBP1P61758 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VBP1P61758 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VBP1P61758 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VBP1P61758 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VBP1P61758 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VBP1P61758 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
VBP1P61758 AC090877.2-201ENST00000558441 1738 ntBASIC19.79■□□□□ 0.76
VBP1P61758 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VBP1P61758 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
VBP1P61758 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
VBP1P61758 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
VBP1P61758 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
VBP1P61758 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC19.79■□□□□ 0.76
VBP1P61758 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC19.79■□□□□ 0.76
VBP1P61758 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.79■□□□□ 0.76
VBP1P61758 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms