Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC24.46■■□□□ 1.51
PEX3P56589 AL031432.3-201ENST00000607698 485 ntBASIC24.46■■□□□ 1.51
PEX3P56589 AC005837.3-201ENST00000612163 286 ntBASIC24.46■■□□□ 1.51
PEX3P56589 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC24.46■■□□□ 1.51
PEX3P56589 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
PEX3P56589 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC24.46■■□□□ 1.51
PEX3P56589 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
PEX3P56589 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
PEX3P56589 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
PEX3P56589 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC24.45■■□□□ 1.5
PEX3P56589 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC24.45■■□□□ 1.5
PEX3P56589 GRAMD4P4-201ENST00000613563 1115 ntBASIC24.45■■□□□ 1.5
PEX3P56589 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC24.45■■□□□ 1.5
PEX3P56589 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC24.45■■□□□ 1.5
PEX3P56589 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
PEX3P56589 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
PEX3P56589 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC24.44■■□□□ 1.5
PEX3P56589 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
PEX3P56589 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
PEX3P56589 EDA-201ENST00000338901 1233 ntBASIC24.44■■□□□ 1.5
PEX3P56589 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
PEX3P56589 AL355001.2-201ENST00000620617 1191 ntBASIC24.44■■□□□ 1.5
PEX3P56589 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC24.44■■□□□ 1.5
PEX3P56589 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
PEX3P56589 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
PEX3P56589 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
PEX3P56589 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
PEX3P56589 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
PEX3P56589 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PEX3P56589 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
PEX3P56589 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PEX3P56589 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
PEX3P56589 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PEX3P56589 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC24.42■■□□□ 1.5
PEX3P56589 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
PEX3P56589 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC24.42■■□□□ 1.5
PEX3P56589 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PEX3P56589 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC24.42■■□□□ 1.5
PEX3P56589 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
PEX3P56589 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
PEX3P56589 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC24.41■■□□□ 1.5
PEX3P56589 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
PEX3P56589 SUDS3P1-201ENST00000505831 966 ntBASIC24.41■■□□□ 1.5
PEX3P56589 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC24.41■■□□□ 1.5
PEX3P56589 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
PEX3P56589 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
PEX3P56589 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC24.4■■□□□ 1.5
PEX3P56589 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
PEX3P56589 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC24.4■■□□□ 1.5
PEX3P56589 AP001330.3-201ENST00000520123 633 ntBASIC24.4■■□□□ 1.5
PEX3P56589 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
PEX3P56589 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PEX3P56589 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
PEX3P56589 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
PEX3P56589 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC24.39■■□□□ 1.5
PEX3P56589 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.5
PEX3P56589 SNX3-202ENST00000349379 890 ntTSL 2 BASIC24.39■■□□□ 1.49
PEX3P56589 SLC47A1P1-202ENST00000449666 945 ntBASIC24.39■■□□□ 1.49
PEX3P56589 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.49
PEX3P56589 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.49
PEX3P56589 AF213884.3-201ENST00000563833 479 ntBASIC24.39■■□□□ 1.49
PEX3P56589 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC24.39■■□□□ 1.49
PEX3P56589 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
PEX3P56589 AC010525.1-201ENST00000585559 441 ntBASIC24.39■■□□□ 1.49
PEX3P56589 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC24.39■■□□□ 1.49
PEX3P56589 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC24.39■■□□□ 1.49
PEX3P56589 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.49
PEX3P56589 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC24.39■■□□□ 1.49
PEX3P56589 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
PEX3P56589 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC24.38■■□□□ 1.49
PEX3P56589 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
PEX3P56589 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC24.38■■□□□ 1.49
PEX3P56589 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
PEX3P56589 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC24.38■■□□□ 1.49
PEX3P56589 AC142381.2-201ENST00000566120 298 ntBASIC24.38■■□□□ 1.49
PEX3P56589 AC008764.7-201ENST00000593779 1081 ntBASIC24.38■■□□□ 1.49
PEX3P56589 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
PEX3P56589 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC24.38■■□□□ 1.49
PEX3P56589 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
PEX3P56589 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC24.38■■□□□ 1.49
PEX3P56589 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PEX3P56589 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
PEX3P56589 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
PEX3P56589 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC24.37■■□□□ 1.49
PEX3P56589 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PEX3P56589 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC24.37■■□□□ 1.49
PEX3P56589 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PEX3P56589 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC24.37■■□□□ 1.49
PEX3P56589 MIR939-201ENST00000401314 82 ntBASIC24.37■■□□□ 1.49
PEX3P56589 BX842568.3-201ENST00000418104 571 ntBASIC24.37■■□□□ 1.49
PEX3P56589 OR2I1P-207ENST00000453522 948 ntBASIC24.37■■□□□ 1.49
PEX3P56589 MAG-206ENST00000597035 542 ntTSL 4 BASIC24.37■■□□□ 1.49
PEX3P56589 AL136967.2-201ENST00000623968 743 ntBASIC24.37■■□□□ 1.49
PEX3P56589 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PEX3P56589 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PEX3P56589 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
PEX3P56589 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PEX3P56589 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
PEX3P56589 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
PEX3P56589 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms