Protein–RNA interactions for Protein: P54108

CRISP3, Cysteine-rich secretory protein 3, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRISP3P54108 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.69■□□□□ 0.9
CRISP3P54108 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CRISP3P54108 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CRISP3P54108 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CRISP3P54108 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CRISP3P54108 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CRISP3P54108 AC092028.1-203ENST00000608262 953 ntBASIC20.69■□□□□ 0.9
CRISP3P54108 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
CRISP3P54108 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.69■□□□□ 0.9
CRISP3P54108 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.69■□□□□ 0.9
CRISP3P54108 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CRISP3P54108 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.68■□□□□ 0.9
CRISP3P54108 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CRISP3P54108 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.68■□□□□ 0.9
CRISP3P54108 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
CRISP3P54108 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CRISP3P54108 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CRISP3P54108 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CRISP3P54108 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.68■□□□□ 0.9
CRISP3P54108 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
CRISP3P54108 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CRISP3P54108 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CRISP3P54108 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CRISP3P54108 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CRISP3P54108 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CRISP3P54108 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CRISP3P54108 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CRISP3P54108 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.67■□□□□ 0.9
CRISP3P54108 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CRISP3P54108 LINC01529-204ENST00000636474 1715 ntBASIC20.67■□□□□ 0.9
CRISP3P54108 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CRISP3P54108 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CRISP3P54108 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CRISP3P54108 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.67■□□□□ 0.9
CRISP3P54108 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.67■□□□□ 0.9
CRISP3P54108 FP325331.1-202ENST00000623531 1380 ntBASIC20.67■□□□□ 0.9
CRISP3P54108 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CRISP3P54108 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CRISP3P54108 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CRISP3P54108 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CRISP3P54108 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
CRISP3P54108 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CRISP3P54108 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CRISP3P54108 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CRISP3P54108 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.66■□□□□ 0.9
CRISP3P54108 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.66■□□□□ 0.9
CRISP3P54108 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CRISP3P54108 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
CRISP3P54108 MTDHP2-201ENST00000601468 714 ntBASIC20.66■□□□□ 0.9
CRISP3P54108 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CRISP3P54108 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CRISP3P54108 ECEL1P1-201ENST00000373592 1742 ntBASIC20.66■□□□□ 0.9
CRISP3P54108 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.66■□□□□ 0.9
CRISP3P54108 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CRISP3P54108 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CRISP3P54108 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.66■□□□□ 0.9
CRISP3P54108 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.66■□□□□ 0.9
CRISP3P54108 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CRISP3P54108 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CRISP3P54108 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.65■□□□□ 0.9
CRISP3P54108 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CRISP3P54108 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
CRISP3P54108 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CRISP3P54108 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CRISP3P54108 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CRISP3P54108 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CRISP3P54108 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CRISP3P54108 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CRISP3P54108 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CRISP3P54108 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CRISP3P54108 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.65■□□□□ 0.9
CRISP3P54108 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CRISP3P54108 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CRISP3P54108 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.64■□□□□ 0.9
CRISP3P54108 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.89
CRISP3P54108 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
CRISP3P54108 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CRISP3P54108 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CRISP3P54108 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.64■□□□□ 0.89
CRISP3P54108 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CRISP3P54108 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.64■□□□□ 0.89
CRISP3P54108 MIR4787-201ENST00000607364 84 ntBASIC20.64■□□□□ 0.89
CRISP3P54108 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.64■□□□□ 0.89
CRISP3P54108 LINC00526-201ENST00000581067 1875 ntBASIC20.64■□□□□ 0.89
CRISP3P54108 AC242852.2-201ENST00000615738 1807 ntBASIC20.64■□□□□ 0.89
CRISP3P54108 AC127496.7-201ENST00000625110 1798 ntBASIC20.64■□□□□ 0.89
CRISP3P54108 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CRISP3P54108 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CRISP3P54108 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CRISP3P54108 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CRISP3P54108 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.63■□□□□ 0.89
CRISP3P54108 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.63■□□□□ 0.89
CRISP3P54108 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.63■□□□□ 0.89
CRISP3P54108 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.63■□□□□ 0.89
CRISP3P54108 RARRES2P1-201ENST00000474487 481 ntBASIC20.63■□□□□ 0.89
CRISP3P54108 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CRISP3P54108 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CRISP3P54108 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CRISP3P54108 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.63■□□□□ 0.89
CRISP3P54108 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms