Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
POLR2JP52435 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
POLR2JP52435 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.18■□□□□ 0.98
POLR2JP52435 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
POLR2JP52435 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
POLR2JP52435 TSPY13P-201ENST00000338964 914 ntBASIC21.18■□□□□ 0.98
POLR2JP52435 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.18■□□□□ 0.98
POLR2JP52435 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.18■□□□□ 0.98
POLR2JP52435 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
POLR2JP52435 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
POLR2JP52435 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
POLR2JP52435 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
POLR2JP52435 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.18■□□□□ 0.98
POLR2JP52435 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
POLR2JP52435 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.18■□□□□ 0.98
POLR2JP52435 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
POLR2JP52435 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
POLR2JP52435 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
POLR2JP52435 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
POLR2JP52435 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
POLR2JP52435 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
POLR2JP52435 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
POLR2JP52435 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
POLR2JP52435 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.16■□□□□ 0.98
POLR2JP52435 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
POLR2JP52435 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.16■□□□□ 0.98
POLR2JP52435 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
POLR2JP52435 MIR4508-201ENST00000584178 70 ntBASIC21.16■□□□□ 0.98
POLR2JP52435 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.16■□□□□ 0.98
POLR2JP52435 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.16■□□□□ 0.98
POLR2JP52435 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
POLR2JP52435 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
POLR2JP52435 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
POLR2JP52435 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
POLR2JP52435 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
POLR2JP52435 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
POLR2JP52435 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.15■□□□□ 0.98
POLR2JP52435 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.15■□□□□ 0.98
POLR2JP52435 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
POLR2JP52435 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
POLR2JP52435 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.15■□□□□ 0.98
POLR2JP52435 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
POLR2JP52435 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
POLR2JP52435 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.14■□□□□ 0.98
POLR2JP52435 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
POLR2JP52435 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
POLR2JP52435 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
POLR2JP52435 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.14■□□□□ 0.97
POLR2JP52435 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
POLR2JP52435 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
POLR2JP52435 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
POLR2JP52435 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
POLR2JP52435 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
POLR2JP52435 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
POLR2JP52435 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
POLR2JP52435 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
POLR2JP52435 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
POLR2JP52435 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.13■□□□□ 0.97
POLR2JP52435 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
POLR2JP52435 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.13■□□□□ 0.97
POLR2JP52435 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
POLR2JP52435 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.13■□□□□ 0.97
POLR2JP52435 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
POLR2JP52435 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.13■□□□□ 0.97
POLR2JP52435 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
POLR2JP52435 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
POLR2JP52435 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
POLR2JP52435 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
POLR2JP52435 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
POLR2JP52435 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
POLR2JP52435 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.12■□□□□ 0.97
POLR2JP52435 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
POLR2JP52435 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.12■□□□□ 0.97
POLR2JP52435 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
POLR2JP52435 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
POLR2JP52435 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
POLR2JP52435 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.11■□□□□ 0.97
POLR2JP52435 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
POLR2JP52435 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
POLR2JP52435 GUK1-208ENST00000366728 842 ntTSL 2 BASIC21.11■□□□□ 0.97
POLR2JP52435 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
POLR2JP52435 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.11■□□□□ 0.97
POLR2JP52435 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
POLR2JP52435 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
POLR2JP52435 LINC01529-204ENST00000636474 1715 ntBASIC21.1■□□□□ 0.97
POLR2JP52435 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
POLR2JP52435 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
POLR2JP52435 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.1■□□□□ 0.97
POLR2JP52435 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.1■□□□□ 0.97
POLR2JP52435 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
POLR2JP52435 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.1■□□□□ 0.97
POLR2JP52435 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
POLR2JP52435 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
POLR2JP52435 FBXW4P1-201ENST00000426721 2239 ntBASIC21.09■□□□□ 0.97
POLR2JP52435 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
POLR2JP52435 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
POLR2JP52435 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
POLR2JP52435 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
POLR2JP52435 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
POLR2JP52435 PKD1P6-201ENST00000343738 4769 ntBASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms